MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP124385 Location: 4139533..4187688 Organism: Escherichia coli strain AVS0153 Replicon: chromosome
Accession: NZ_CP124385 Location: 4139533..4187688 Organism: Escherichia coli strain AVS0153 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP67_RS20305 (4135798) | 4135798..4136901 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJP67_RS20310 (4136913) | 4136913..4138166 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJP67_RS20320 (4138371) | 4138371..4138574 | - | 204 | Protein_3976 | integrase | - |
| QJP67_RS20325 (4138720) | 4138720..4139190 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJP67_RS20330 (4139168) | 4139168..4139326 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJP67_RS20335 (4139533) | 4139533..4140780 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJP67_RS20340 (4140770) | 4140770..4142407 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJP67_RS20345 (4142401) | 4142401..4145499 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJP67_RS20350 (4145783) | 4145783..4146565 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJP67_RS20355 (4146552) | 4146552..4147472 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJP67_RS20360 (4147637) | 4147637..4148413 | - | 777 | WP_282503822.1 | hypothetical protein ; Integrase | Integrase |
| QJP67_RS20365 (4148621) | 4148621..4148956 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJP67_RS20370 (4149183) | 4149183..4149341 | - | 159 | Protein_3986 | integrase | - |
| QJP67_RS20375 (4149390) | 4149390..4149575 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJP67_RS20380 (4149790) | 4149790..4150404 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJP67_RS20385 (4150475) | 4150475..4150641 | + | 167 | Protein_3989 | tail fiber assembly protein | - |
| QJP67_RS20390 (4150653) | 4150653..4150982 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJP67_RS20395 (4151289) | 4151289..4151999 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJP67_RS20400 (4151968) | 4151968..4153611 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| QJP67_RS20405 (4153601) | 4153601..4156126 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJP67_RS20410 (4156152) | 4156152..4156820 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJP67_RS20415 (4156877) | 4156877..4157464 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJP67_RS20420 (4157539) | 4157539..4158081 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJP67_RS20425 (4158905) | 4158905..4159130 | + | 226 | Protein_3997 | protein YkgL | - |
| QJP67_RS20430 (4159165) | 4159165..4159305 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJP67_RS20435 (4159305) | 4159305..4159568 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJP67_RS20440 (4159904) | 4159904..4159987 | - | 84 | Protein_4000 | hypothetical protein | - |
| QJP67_RS20445 (4160507) | 4160507..4161649 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| QJP67_RS20450 (4161822) | 4161822..4162742 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJP67_RS20455 (4162899) | 4162899..4163825 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP67_RS20460 (4164025) | 4164025..4164918 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP67_RS20465 (4164949) | 4164949..4165938 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJP67_RS20470 (4165965) | 4165965..4166816 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QJP67_RS20475 (4167382) | 4167382..4171629 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| QJP67_RS20480 (4171754) | 4171754..4172611 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| QJP67_RS20485 (4172859) | 4172859..4173728 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| QJP67_RS20490 (4173888) | 4173888..4174481 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| QJP67_RS20495 (4174493) | 4174493..4174729 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QJP67_RS20500 (4174838) | 4174838..4176163 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QJP67_RS20505 (4176390) | 4176390..4177244 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QJP67_RS20510 (4177770) | 4177770..4178489 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| QJP67_RS20515 (4178500) | 4178500..4179927 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QJP67_RS20520 (4179920) | 4179920..4180615 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| QJP67_RS20525 (4180858) | 4180858..4181526 | - | 669 | WP_001005267.1 | protein YkgH | - |
| QJP67_RS20530 (4181710) | 4181710..4184001 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| QJP67_RS20535 (4184043) | 4184043..4184804 | - | 762 | WP_001213045.1 | protein HyxA | - |
| QJP67_RS20540 (4184958) | 4184958..4185752 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| QJP67_RS20545 (4186082) | 4186082..4186645 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| QJP67_RS20550 (4187730) | 4187730..4189400 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| QJP67_RS20555 (4189414) | 4189414..4190886 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| QJP67_RS20560 (4190900) | 4190900..4191487 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|