MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124385 Location: 3353462..3378404 Organism: Escherichia coli strain AVS0153 Replicon: chromosome
Accession: NZ_CP124385 Location: 3353462..3378404 Organism: Escherichia coli strain AVS0153 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP67_RS16480 (3350310) | 3350310..3351029 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP67_RS16485 (3351026) | 3351026..3352657 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP67_RS16490 (3352838) | 3352838..3353068 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP67_RS16495 (3353080) | 3353080..3353352 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP67_RS16500 (3353462) | 3353462..3355999 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP67_RS16505 (3356032) | 3356032..3356724 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP67_RS16510 (3356789) | 3356789..3357313 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP67_RS16515 (3357714) | 3357714..3361526 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP67_RS16520 (3362424) | 3362424..3363254 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP67_RS16525 (3364410) | 3364410..3368339 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP67_RS16530 (3368553) | 3368553..3368825 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP67_RS16535 (3369053) | 3369053..3369349 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP67_RS16540 (3369377) | 3369377..3369550 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP67_RS16545 (3369669) | 3369669..3371186 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP67_RS16550 (3371423) | 3371423..3372880 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP67_RS16555 (3372939) | 3372939..3375086 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP67_RS16560 (3375166) | 3375166..3376500 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP67_RS16565 (3376866) | 3376866..3378404 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP67_RS16570 (3378664) | 3378664..3378823 | - | 160 | Protein_3240 | integrase | - |
| QJP67_RS16575 (3379208) | 3379208..3380743 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| QJP67_RS16580 (3380814) | 3380814..3380975 | - | 162 | Protein_3242 | DUF4942 domain-containing protein | - |
| QJP67_RS16585 (3381066) | 3381066..3382565 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| QJP67_RS16590 (3382562) | 3382562..3383317 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|