MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124353 Location: 3354720..3379662 Organism: Escherichia coli strain AVS0226 Replicon: chromosome
Accession: NZ_CP124353 Location: 3354720..3379662 Organism: Escherichia coli strain AVS0226 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP71_RS16475 (3351568) | 3351568..3352287 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP71_RS16480 (3352284) | 3352284..3353915 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP71_RS16485 (3354096) | 3354096..3354326 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP71_RS16490 (3354338) | 3354338..3354610 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP71_RS16495 (3354720) | 3354720..3357257 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| QJP71_RS16500 (3357290) | 3357290..3357982 | - | 693 | WP_000760483.1 | S-adenosylmethionine decarboxylase proenzyme | VF |
| QJP71_RS16505 (3358047) | 3358047..3358571 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP71_RS16510 (3358972) | 3358972..3362784 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| QJP71_RS16515 (3363682) | 3363682..3364512 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP71_RS16520 (3365668) | 3365668..3369597 | + | 3930 | WP_001080129.1 | Outer membrane protein assembly factor BamB | VF |
| QJP71_RS16525 (3369811) | 3369811..3370083 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP71_RS16530 (3370311) | 3370311..3370607 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP71_RS16535 (3370635) | 3370635..3370808 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP71_RS16540 (3370927) | 3370927..3372444 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP71_RS16545 (3372681) | 3372681..3374138 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP71_RS16550 (3374197) | 3374197..3376344 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP71_RS16555 (3376424) | 3376424..3377758 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP71_RS16560 (3378124) | 3378124..3379662 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP71_RS16565 (3379922) | 3379922..3380081 | - | 160 | Protein_3239 | integrase | - |
| QJP71_RS16570 (3380466) | 3380466..3382001 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| QJP71_RS16575 (3382072) | 3382072..3382233 | - | 162 | Protein_3241 | DUF4942 domain-containing protein | - |
| QJP71_RS16580 (3382324) | 3382324..3383823 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| QJP71_RS16585 (3383820) | 3383820..3384575 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|