MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP124351 Location: 4140783..4188938 Organism: Escherichia coli strain AVS0362 Replicon: chromosome
Accession: NZ_CP124351 Location: 4140783..4188938 Organism: Escherichia coli strain AVS0362 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP84_RS20305 (4137048) | 4137048..4138151 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJP84_RS20310 (4138163) | 4138163..4139416 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJP84_RS20320 (4139621) | 4139621..4139824 | - | 204 | Protein_3976 | integrase | - |
| QJP84_RS20325 (4139970) | 4139970..4140440 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJP84_RS20330 (4140418) | 4140418..4140576 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJP84_RS20335 (4140783) | 4140783..4142030 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJP84_RS20340 (4142020) | 4142020..4143657 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJP84_RS20345 (4143651) | 4143651..4146749 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJP84_RS20350 (4147033) | 4147033..4147815 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJP84_RS20355 (4147802) | 4147802..4148722 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJP84_RS20360 (4148887) | 4148887..4149663 | - | 777 | WP_282503822.1 | hypothetical protein ; Integrase | Integrase |
| QJP84_RS20365 (4149871) | 4149871..4150206 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJP84_RS20370 (4150433) | 4150433..4150591 | - | 159 | Protein_3986 | integrase | - |
| QJP84_RS20375 (4150640) | 4150640..4150825 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJP84_RS20380 (4151040) | 4151040..4151654 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJP84_RS20385 (4151725) | 4151725..4151891 | + | 167 | Protein_3989 | tail fiber assembly protein | - |
| QJP84_RS20390 (4151903) | 4151903..4152232 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJP84_RS20395 (4152539) | 4152539..4153249 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJP84_RS20400 (4153218) | 4153218..4154861 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| QJP84_RS20405 (4154851) | 4154851..4157376 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJP84_RS20410 (4157402) | 4157402..4158070 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJP84_RS20415 (4158127) | 4158127..4158714 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJP84_RS20420 (4158789) | 4158789..4159331 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJP84_RS20425 (4160155) | 4160155..4160380 | + | 226 | Protein_3997 | protein YkgL | - |
| QJP84_RS20430 (4160415) | 4160415..4160555 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJP84_RS20435 (4160555) | 4160555..4160818 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJP84_RS20440 (4161154) | 4161154..4161237 | - | 84 | Protein_4000 | hypothetical protein | - |
| QJP84_RS20445 (4161757) | 4161757..4162899 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| QJP84_RS20450 (4163072) | 4163072..4163992 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJP84_RS20455 (4164149) | 4164149..4165075 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP84_RS20460 (4165275) | 4165275..4166168 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP84_RS20465 (4166199) | 4166199..4167188 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJP84_RS20470 (4167215) | 4167215..4168066 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QJP84_RS20475 (4168632) | 4168632..4172879 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| QJP84_RS20480 (4173004) | 4173004..4173861 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| QJP84_RS20485 (4174109) | 4174109..4174978 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| QJP84_RS20490 (4175138) | 4175138..4175731 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| QJP84_RS20495 (4175743) | 4175743..4175979 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QJP84_RS20500 (4176088) | 4176088..4177413 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QJP84_RS20505 (4177640) | 4177640..4178494 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QJP84_RS20510 (4179020) | 4179020..4179739 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| QJP84_RS20515 (4179750) | 4179750..4181177 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QJP84_RS20520 (4181170) | 4181170..4181865 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| QJP84_RS20525 (4182108) | 4182108..4182776 | - | 669 | WP_001005267.1 | protein YkgH | - |
| QJP84_RS20530 (4182960) | 4182960..4185251 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| QJP84_RS20535 (4185293) | 4185293..4186054 | - | 762 | WP_001213045.1 | protein HyxA | - |
| QJP84_RS20540 (4186208) | 4186208..4187002 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| QJP84_RS20545 (4187332) | 4187332..4187895 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| QJP84_RS20550 (4188980) | 4188980..4190650 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| QJP84_RS20555 (4190664) | 4190664..4192136 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| QJP84_RS20560 (4192150) | 4192150..4192737 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|