MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124351 Location: 3354712..3379654 Organism: Escherichia coli strain AVS0362 Replicon: chromosome
Accession: NZ_CP124351 Location: 3354712..3379654 Organism: Escherichia coli strain AVS0362 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP84_RS16480 (3351560) | 3351560..3352279 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP84_RS16485 (3352276) | 3352276..3353907 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP84_RS16490 (3354088) | 3354088..3354318 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP84_RS16495 (3354330) | 3354330..3354602 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP84_RS16500 (3354712) | 3354712..3357249 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP84_RS16505 (3357282) | 3357282..3357974 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP84_RS16510 (3358039) | 3358039..3358563 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP84_RS16515 (3358964) | 3358964..3362776 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP84_RS16520 (3363674) | 3363674..3364504 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP84_RS16525 (3365660) | 3365660..3369589 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP84_RS16530 (3369803) | 3369803..3370075 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP84_RS16535 (3370303) | 3370303..3370599 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP84_RS16540 (3370627) | 3370627..3370800 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP84_RS16545 (3370919) | 3370919..3372436 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP84_RS16550 (3372673) | 3372673..3374130 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP84_RS16555 (3374189) | 3374189..3376336 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP84_RS16560 (3376416) | 3376416..3377750 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP84_RS16565 (3378116) | 3378116..3379654 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP84_RS16570 (3379914) | 3379914..3380073 | - | 160 | Protein_3240 | integrase | - |
| QJP84_RS16575 (3380458) | 3380458..3381993 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| QJP84_RS16580 (3382064) | 3382064..3382225 | - | 162 | Protein_3242 | DUF4942 domain-containing protein | - |
| QJP84_RS16585 (3382316) | 3382316..3383815 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| QJP84_RS16590 (3383812) | 3383812..3384567 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|