MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124345 Location: 4525528..4566451 Organism: Escherichia coli strain AVS0530 Replicon: chromosome
Accession: NZ_CP124345 Location: 4525528..4566451 Organism: Escherichia coli strain AVS0530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP77_RS22055 (4520960) | 4520960..4521778 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP77_RS22060 (4521801) | 4521801..4522379 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP77_RS22070 (4524357) | 4524357..4525535 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP77_RS22075 (4525528) | 4525528..4526979 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP77_RS22080 (4527054) | 4527054..4527187 | - | 134 | Protein_4335 | phosphate-starvation-inducible protein PsiE | - |
| QJP77_RS22085 (4527189) | 4527189..4527305 | - | 117 | Protein_4336 | phosphoporin PhoE | - |
| QJP77_RS22090 (4527603) | 4527603..4528237 | + | 635 | Protein_4337 | IS3 family transposase IS2 | Transposase |
| QJP77_RS22095 (4528293) | 4528293..4529171 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP77_RS22100 (4529499) | 4529499..4530230 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP77_RS22105 (4531713) | 4531713..4532936 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP77_RS22110 (4533037) | 4533037..4533921 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP77_RS22115 (4534124) | 4534124..4534804 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP77_RS22120 (4534952) | 4534952..4535629 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP77_RS22125 (4535635) | 4535635..4535868 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP77_RS22130 (4535958) | 4535958..4536776 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP77_RS22135 (4536867) | 4536867..4537352 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP77_RS22140 (4537367) | 4537367..4537843 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP77_RS22145 (4537912) | 4537912..4538133 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP77_RS22150 (4538212) | 4538212..4538580 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP77_RS22155 (4538670) | 4538670..4539047 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP77_RS22160 (4539044) | 4539044..4539532 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP77_RS22165 (4539544) | 4539544..4539741 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP77_RS22170 (4539826) | 4539826..4540680 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP77_RS22175 (4540998) | 4540998..4541157 | + | 160 | Protein_4354 | integrase | - |
| QJP77_RS22180 (4541417) | 4541417..4542955 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP77_RS22185 (4543321) | 4543321..4544655 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP77_RS22190 (4544735) | 4544735..4546882 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP77_RS22195 (4546941) | 4546941..4548398 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP77_RS22200 (4548635) | 4548635..4550152 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP77_RS22205 (4550271) | 4550271..4550444 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP77_RS22210 (4550472) | 4550472..4550768 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP77_RS22215 (4550996) | 4550996..4551268 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP77_RS22220 (4551482) | 4551482..4555411 | - | 3930 | WP_001080127.1 | hypothetical protein | VF |
| QJP77_RS22225 (4556566) | 4556566..4557396 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP77_RS22230 (4558294) | 4558294..4562145 | - | 3852 | WP_012896891.1 | hypothetical protein | VF |
| QJP77_RS22235 (4562551) | 4562551..4563120 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP77_RS22240 (4563182) | 4563182..4563886 | + | 705 | WP_001227591.1 | hypothetical protein | VF |
| QJP77_RS22245 (4563914) | 4563914..4566451 | + | 2538 | WP_000866257.1 | hypothetical protein | VF |
| QJP77_RS22250 (4566561) | 4566561..4566833 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP77_RS22255 (4566845) | 4566845..4567075 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP77_RS22260 (4567256) | 4567256..4568887 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP77_RS22265 (4568884) | 4568884..4569603 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|