MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124339 Location: 4525283..4566206 Organism: Escherichia coli strain AVS0713 Replicon: chromosome
Accession: NZ_CP124339 Location: 4525283..4566206 Organism: Escherichia coli strain AVS0713 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP93_RS22055 (4520715) | 4520715..4521533 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP93_RS22060 (4521556) | 4521556..4522134 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP93_RS22070 (4524112) | 4524112..4525290 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP93_RS22075 (4525283) | 4525283..4526734 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP93_RS22080 (4526809) | 4526809..4526942 | - | 134 | Protein_4335 | phosphate-starvation-inducible protein PsiE | - |
| QJP93_RS22085 (4526944) | 4526944..4527060 | - | 117 | Protein_4336 | phosphoporin PhoE | - |
| QJP93_RS22090 (4527358) | 4527358..4527992 | + | 635 | Protein_4337 | IS3 family transposase IS2 | Transposase |
| QJP93_RS22095 (4528048) | 4528048..4528926 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP93_RS22100 (4529254) | 4529254..4529985 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP93_RS22105 (4531468) | 4531468..4532691 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP93_RS22110 (4532792) | 4532792..4533676 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP93_RS22115 (4533879) | 4533879..4534559 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP93_RS22120 (4534707) | 4534707..4535384 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP93_RS22125 (4535390) | 4535390..4535623 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP93_RS22130 (4535713) | 4535713..4536531 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP93_RS22135 (4536622) | 4536622..4537107 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP93_RS22140 (4537122) | 4537122..4537598 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP93_RS22145 (4537667) | 4537667..4537888 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP93_RS22150 (4537967) | 4537967..4538335 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP93_RS22155 (4538425) | 4538425..4538802 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP93_RS22160 (4538799) | 4538799..4539287 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP93_RS22165 (4539299) | 4539299..4539496 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP93_RS22170 (4539581) | 4539581..4540435 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP93_RS22175 (4540753) | 4540753..4540912 | + | 160 | Protein_4354 | integrase | - |
| QJP93_RS22180 (4541172) | 4541172..4542710 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP93_RS22185 (4543076) | 4543076..4544410 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP93_RS22190 (4544490) | 4544490..4546637 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP93_RS22195 (4546696) | 4546696..4548153 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP93_RS22200 (4548390) | 4548390..4549907 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP93_RS22205 (4550026) | 4550026..4550199 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP93_RS22210 (4550227) | 4550227..4550523 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP93_RS22215 (4550751) | 4550751..4551023 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP93_RS22220 (4551237) | 4551237..4555166 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP93_RS22225 (4556321) | 4556321..4557151 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP93_RS22230 (4558049) | 4558049..4561900 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP93_RS22235 (4562306) | 4562306..4562875 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP93_RS22240 (4562937) | 4562937..4563641 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP93_RS22245 (4563669) | 4563669..4566206 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP93_RS22250 (4566316) | 4566316..4566588 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP93_RS22255 (4566600) | 4566600..4566830 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP93_RS22260 (4567011) | 4567011..4568642 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP93_RS22265 (4568639) | 4568639..4569358 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|