MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124332 Location: 3355070..3380012 Organism: Escherichia coli strain AVS0753 Replicon: chromosome
Accession: NZ_CP124332 Location: 3355070..3380012 Organism: Escherichia coli strain AVS0753 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP82_RS16500 (3351918) | 3351918..3352637 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP82_RS16505 (3352634) | 3352634..3354265 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP82_RS16510 (3354446) | 3354446..3354676 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP82_RS16515 (3354688) | 3354688..3354960 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP82_RS16520 (3355070) | 3355070..3357607 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP82_RS16525 (3357640) | 3357640..3358332 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP82_RS16530 (3358397) | 3358397..3358921 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP82_RS16535 (3359322) | 3359322..3363134 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP82_RS16540 (3364032) | 3364032..3364862 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP82_RS16545 (3366018) | 3366018..3369947 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP82_RS16550 (3370161) | 3370161..3370433 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP82_RS16555 (3370661) | 3370661..3370957 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP82_RS16560 (3370985) | 3370985..3371158 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP82_RS16565 (3371277) | 3371277..3372794 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP82_RS16570 (3373031) | 3373031..3374488 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP82_RS16575 (3374547) | 3374547..3376694 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP82_RS16580 (3376774) | 3376774..3378108 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP82_RS16585 (3378474) | 3378474..3380012 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP82_RS16590 (3380272) | 3380272..3380431 | - | 160 | Protein_3240 | integrase | - |
| QJP82_RS16595 (3380816) | 3380816..3382351 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| QJP82_RS16600 (3382422) | 3382422..3382583 | - | 162 | Protein_3242 | DUF4942 domain-containing protein | - |
| QJP82_RS16605 (3382674) | 3382674..3384173 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| QJP82_RS16610 (3384170) | 3384170..3384925 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|