MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124326 Location: 4524114..4565037 Organism: Escherichia coli strain AVS0285 Replicon: chromosome
Accession: NZ_CP124326 Location: 4524114..4565037 Organism: Escherichia coli strain AVS0285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP69_RS22065 (4519546) | 4519546..4520364 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP69_RS22070 (4520387) | 4520387..4520965 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP69_RS22080 (4522943) | 4522943..4524121 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP69_RS22085 (4524114) | 4524114..4525565 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP69_RS22090 (4525640) | 4525640..4525773 | - | 134 | Protein_4334 | phosphate-starvation-inducible protein PsiE | - |
| QJP69_RS22095 (4525775) | 4525775..4525891 | - | 117 | Protein_4335 | phosphoporin PhoE | - |
| QJP69_RS22100 (4526189) | 4526189..4526823 | + | 635 | Protein_4336 | IS3 family transposase IS2 | Transposase |
| QJP69_RS22105 (4526879) | 4526879..4527757 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP69_RS22110 (4528085) | 4528085..4528816 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP69_RS22115 (4530299) | 4530299..4531522 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP69_RS22120 (4531623) | 4531623..4532507 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP69_RS22125 (4532710) | 4532710..4533390 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP69_RS22130 (4533538) | 4533538..4534215 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP69_RS22135 (4534221) | 4534221..4534454 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP69_RS22140 (4534544) | 4534544..4535362 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP69_RS22145 (4535453) | 4535453..4535938 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP69_RS22150 (4535953) | 4535953..4536429 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP69_RS22155 (4536498) | 4536498..4536719 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP69_RS22160 (4536798) | 4536798..4537166 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP69_RS22165 (4537256) | 4537256..4537633 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP69_RS22170 (4537630) | 4537630..4538118 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP69_RS22175 (4538130) | 4538130..4538327 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP69_RS22180 (4538412) | 4538412..4539266 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP69_RS22185 (4539584) | 4539584..4539743 | + | 160 | Protein_4353 | integrase | - |
| QJP69_RS22190 (4540003) | 4540003..4541541 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP69_RS22195 (4541907) | 4541907..4543241 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP69_RS22200 (4543321) | 4543321..4545468 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP69_RS22205 (4545527) | 4545527..4546984 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP69_RS22210 (4547221) | 4547221..4548738 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP69_RS22215 (4548857) | 4548857..4549030 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP69_RS22220 (4549058) | 4549058..4549354 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP69_RS22225 (4549582) | 4549582..4549854 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP69_RS22230 (4550068) | 4550068..4553997 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP69_RS22235 (4555152) | 4555152..4555982 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP69_RS22240 (4556880) | 4556880..4560731 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP69_RS22245 (4561137) | 4561137..4561706 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP69_RS22250 (4561768) | 4561768..4562472 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP69_RS22255 (4562500) | 4562500..4565037 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP69_RS22260 (4565147) | 4565147..4565419 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP69_RS22265 (4565431) | 4565431..4565661 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP69_RS22270 (4565842) | 4565842..4567473 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP69_RS22275 (4567470) | 4567470..4568189 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|