MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124324 Location: 4525138..4566061 Organism: Escherichia coli strain AVS0536 Replicon: chromosome
Accession: NZ_CP124324 Location: 4525138..4566061 Organism: Escherichia coli strain AVS0536 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP54_RS22050 (4520570) | 4520570..4521388 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP54_RS22055 (4521411) | 4521411..4521989 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP54_RS22065 (4523967) | 4523967..4525145 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP54_RS22070 (4525138) | 4525138..4526589 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP54_RS22075 (4526664) | 4526664..4526797 | - | 134 | Protein_4335 | phosphate-starvation-inducible protein PsiE | - |
| QJP54_RS22080 (4526799) | 4526799..4526915 | - | 117 | Protein_4336 | phosphoporin PhoE | - |
| QJP54_RS22085 (4527213) | 4527213..4527847 | + | 635 | Protein_4337 | IS3 family transposase IS2 | Transposase |
| QJP54_RS22090 (4527903) | 4527903..4528781 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP54_RS22095 (4529109) | 4529109..4529840 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP54_RS22100 (4531323) | 4531323..4532546 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP54_RS22105 (4532647) | 4532647..4533531 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP54_RS22110 (4533734) | 4533734..4534414 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP54_RS22115 (4534562) | 4534562..4535239 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP54_RS22120 (4535245) | 4535245..4535478 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP54_RS22125 (4535568) | 4535568..4536386 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP54_RS22130 (4536477) | 4536477..4536962 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP54_RS22135 (4536977) | 4536977..4537453 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP54_RS22140 (4537522) | 4537522..4537743 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP54_RS22145 (4537822) | 4537822..4538190 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP54_RS22150 (4538280) | 4538280..4538657 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP54_RS22155 (4538654) | 4538654..4539142 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP54_RS22160 (4539154) | 4539154..4539351 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP54_RS22165 (4539436) | 4539436..4540290 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP54_RS22170 (4540608) | 4540608..4540767 | + | 160 | Protein_4354 | integrase | - |
| QJP54_RS22175 (4541027) | 4541027..4542565 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP54_RS22180 (4542931) | 4542931..4544265 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP54_RS22185 (4544345) | 4544345..4546492 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP54_RS22190 (4546551) | 4546551..4548008 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP54_RS22195 (4548245) | 4548245..4549762 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP54_RS22200 (4549881) | 4549881..4550054 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP54_RS22205 (4550082) | 4550082..4550378 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP54_RS22210 (4550606) | 4550606..4550878 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP54_RS22215 (4551092) | 4551092..4555021 | - | 3930 | WP_001080127.1 | hypothetical protein | VF |
| QJP54_RS22220 (4556176) | 4556176..4557006 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP54_RS22225 (4557904) | 4557904..4561755 | - | 3852 | WP_012896891.1 | hypothetical protein | VF |
| QJP54_RS22230 (4562161) | 4562161..4562730 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP54_RS22235 (4562792) | 4562792..4563496 | + | 705 | WP_001227591.1 | hypothetical protein | VF |
| QJP54_RS22240 (4563524) | 4563524..4566061 | + | 2538 | WP_000866257.1 | hypothetical protein | VF |
| QJP54_RS22245 (4566171) | 4566171..4566443 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP54_RS22250 (4566455) | 4566455..4566685 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP54_RS22255 (4566866) | 4566866..4568497 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP54_RS22260 (4568494) | 4568494..4569213 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|