MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 73308 bp
Accession: NZ_CP123206 Location: 1..73308 Organism: Pseudomonas amygdali pv. aesculi strain 6617 Replicon: plasmid pPae6617Z
Accession: NZ_CP123206 Location: 1..73308 Organism: Pseudomonas amygdali pv. aesculi strain 6617 Replicon: plasmid pPae6617Z
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP71_RS28525 | 1..1314 | + | 1314 | WP_060409915.1 | replication initiation protein | - |
| QEP71_RS28530 | 1540..1827 | + | 288 | WP_060409916.1 | HU family DNA-binding protein | - |
| QEP71_RS28535 | 2586..3626 | + | 1041 | WP_081079964.1 | YopJ family type III secretion system effector XopJ | - |
| QEP71_RS28540 | 3785..4483 | - | 699 | WP_243580939.1 | GNAT family N-acetyltransferase | - |
| QEP71_RS28545 | 4805..5143 | - | 339 | Protein_4 | IS91 family transposase IS801 | Transposase |
| QEP71_RS28550 | 5191..6000 | - | 810 | WP_057412986.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28555 | 5997..7019 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28560 | 7106..7489 | - | 384 | Protein_7 | IS91 family transposase IS801 | Transposase |
| QEP71_RS28565 | 7901..8176 | + | 276 | WP_060409893.1 | hypothetical protein | - |
| QEP71_RS28570 | 8265..9128 | - | 864 | WP_234785920.1 | HNH endonuclease | - |
| QEP71_RS28575 | 9326..9955 | + | 630 | WP_004666923.1 | ParA family partition ATPase | - |
| QEP71_RS28580 | 9976..10194 | + | 219 | WP_004666922.1 | plasmid partition protein ParG | - |
| QEP71_RS28585 | 10540..10821 | + | 282 | Protein_12 | SOS response-associated peptidase family protein | - |
| QEP71_RS28590 | 11191..11643 | + | 453 | WP_019331432.1 | hypothetical protein | - |
| QEP71_RS28595 | 11737..11916 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| QEP71_RS28605 | 13505..13720 | + | 216 | WP_081079976.1 | carbon storage regulator | - |
| QEP71_RS28610 | 13750..14163 | + | 414 | WP_060406755.1 | TraR/DksA family transcriptional regulator | - |
| QEP71_RS28615 | 14201..14422 | + | 222 | WP_060406754.1 | hypothetical protein | - |
| QEP71_RS28620 | 14433..14729 | + | 297 | WP_025992726.1 | hypothetical protein | - |
| QEP71_RS28625 | 14748..15368 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP71_RS28630 | 15855..16187 | + | 333 | WP_010216246.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEP71_RS28635 | 16189..16473 | + | 285 | WP_010216244.1 | NadS family protein | - |
| QEP71_RS28640 | 16626..17066 | + | 441 | WP_010216242.1 | TrfB-related DNA-binding protein | - |
| QEP71_RS28645 | 17502..17879 | + | 378 | WP_060409849.1 | hypothetical protein | - |
| QEP71_RS28650 | 17926..18762 | + | 837 | WP_060409943.1 | DUF932 domain-containing protein | - |
| QEP71_RS28655 | 18830..19030 | + | 201 | WP_004666908.1 | hypothetical protein | - |
| QEP71_RS28660 | 19097..19375 | - | 279 | WP_004661031.1 | mobilization protein | - |
| QEP71_RS28665 | 19673..20017 | - | 345 | WP_004661028.1 | hypothetical protein | - |
| QEP71_RS28670 | 20277..20606 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| QEP71_RS28675 | 20617..22572 | + | 1956 | WP_060409850.1 | hypothetical protein | Relaxase |
| QEP71_RS28680 | 22867..23709 | - | 843 | WP_060406824.1 | Transcriptional activator protein LasR | VF |
| QEP71_RS28685 | 23766..24359 | - | 594 | WP_060406823.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| QEP71_RS28690 | 24356..25822 | - | 1467 | WP_060406822.1 | 2-amino-4-deoxychorismate synthase | VF |
| QEP71_RS28695 | 26451..27803 | + | 1353 | WP_060406821.1 | phenylacetate--CoA ligase family protein | - |
| QEP71_RS28700 | 27810..28355 | + | 546 | WP_046835423.1 | hypothetical protein | - |
| QEP71_RS28705 | 28357..29040 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| QEP71_RS28710 | 29044..29661 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| QEP71_RS28715 | 29664..30572 | + | 909 | WP_046835404.1 | EamA family transporter | - |
| QEP71_RS28720 | 30559..31434 | + | 876 | WP_060406820.1 | alpha/beta fold hydrolase | - |
| QEP71_RS28725 | 32224..34173 | - | 1950 | WP_060406819.1 | hypothetical protein | VF |
| QEP71_RS28730 | 34341..34637 | + | 297 | Protein_41 | IS5 family transposase ISPsy2 | Transposase |
| QEP71_RS28735 | 34692..35791 | - | 1100 | Protein_42 | IS5 family transposase ISPsy19 | Transposase |
| QEP71_RS28740 | 36018..36719 | + | 702 | WP_032673373.1 | FadR/GntR family transcriptional regulator | - |
| QEP71_RS28745 | 36795..37991 | + | 1197 | WP_060406905.1 | L-2-hydroxyglutarate oxidase | - |
| QEP71_RS28750 | 38032..38340 | + | 309 | Protein_45 | MFS transporter | - |
| QEP71_RS28755 | 38441..39484 | + | 1044 | Protein_46 | MFS transporter | - |
| QEP71_RS28760 | 39543..39950 | + | 408 | WP_243580936.1 | hypothetical protein | - |
| QEP71_RS28765 | 39953..40282 | - | 330 | WP_010214760.1 | helix-turn-helix transcriptional regulator | - |
| QEP71_RS28770 | 40281..40517 | + | 237 | WP_010214759.1 | hypothetical protein | - |
| QEP71_RS28775 | 40534..41067 | + | 534 | WP_060406907.1 | transcription termination/antitermination NusG family protein | - |
| QEP71_RS28780 | 41156..41365 | + | 210 | WP_005622143.1 | hypothetical protein | - |
| QEP71_RS28785 | 41658..42149 | + | 492 | WP_019331462.1 | hypothetical protein | VF |
| QEP71_RS28790 | 42186..42659 | + | 474 | WP_060409861.1 | DotD/TraH family lipoprotein | - |
| QEP71_RS28795 | 42656..43456 | + | 801 | WP_060409925.1 | hypothetical protein | VF |
| QEP71_RS28800 | 43483..44643 | + | 1161 | WP_060409924.1 | hypothetical protein | VF |
| QEP71_RS28805 | 44843..45427 | + | 585 | WP_005769783.1 | hypothetical protein | - |
| QEP71_RS28810 | 45424..45975 | + | 552 | WP_060409899.1 | Cardiolipin synthase B | VF |
| QEP71_RS28815 | 46001..46246 | + | 246 | WP_060406884.1 | hypothetical protein | - |
| QEP71_RS28820 | 46275..46562 | + | 288 | WP_060409898.1 | IcmT/TraK family protein | - |
| QEP71_RS28825 | 46605..47006 | + | 402 | WP_060409923.1 | hypothetical protein | - |
| QEP71_RS28830 | 47039..47848 | - | 810 | WP_057412986.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28835 | 47845..48867 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28840 | 49074..52865 | + | 3792 | WP_060409955.1 | DUF5710 domain-containing protein | - |
| QEP71_RS28845 | 52891..53244 | + | 354 | WP_003344366.1 | traL protein | - |
| QEP71_RS28850 | 53241..53948 | + | 708 | WP_003344369.1 | DotI/IcmL family type IV secretion protein | - |
| QEP71_RS28855 | 53992..55050 | + | 1059 | WP_081079959.1 | hypothetical protein | VF |
| QEP71_RS28860 | 55056..56414 | + | 1359 | WP_060409953.1 | conjugal transfer protein TraO | - |
| QEP71_RS28865 | 56411..57121 | + | 711 | WP_060409952.1 | conjugal transfer protein TraP | - |
| QEP71_RS28870 | 57130..57672 | + | 543 | WP_060406800.1 | conjugal transfer protein TraQ | - |
| QEP71_RS28875 | 57748..58134 | + | 387 | WP_060409852.1 | hypothetical protein | VF |
| QEP71_RS28880 | 58215..58826 | + | 612 | WP_060409851.1 | hypothetical protein | - |
| QEP71_RS28885 | 58801..61857 | + | 3057 | WP_060409951.1 | conjugal transfer protein | - |
| QEP71_RS28890 | 61868..63082 | + | 1215 | WP_060409954.1 | conjugal transfer protein TraW | - |
| QEP71_RS28895 | 63072..63674 | + | 603 | WP_060406860.1 | conjugal transfer protein TraX | - |
| QEP71_RS28900 | 63703..65847 | + | 2145 | WP_060409910.1 | DotA/TraY family protein | - |
| QEP71_RS28905 | 65950..66195 | + | 246 | WP_003344389.1 | hypothetical protein | - |
| QEP71_RS28910 | 66192..66842 | + | 651 | WP_060409909.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QEP71_RS28915 | 66934..68136 | + | 1203 | WP_060409842.1 | hypothetical protein | - |
| QEP71_RS28920 | 68126..68503 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| QEP71_RS28925 | 68500..68700 | - | 201 | WP_060406773.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEP71_RS28930 | 68793..69878 | + | 1086 | WP_060409950.1 | thioredoxin fold domain-containing protein | - |
| QEP71_RS28935 | 69865..72153 | + | 2289 | WP_243580938.1 | F-type conjugative transfer protein TrbC | - |
| QEP71_RS28940 | 72199..72627 | + | 429 | WP_060409866.1 | GntR family transcriptional regulator | - |
| QEP71_RS28945 | 72698..72907 | + | 210 | Protein_84 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|