MGE detailed information
MGE type: Prophage MGE length: 32779 bp
Accession: NZ_CP122938 Location: 2381371..2414149 Organism: Escherichia coli strain ETEC1701 Replicon: chromosome
Accession: NZ_CP122938 Location: 2381371..2414149 Organism: Escherichia coli strain ETEC1701 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX07_RS11565 (2377620) | 2377620..2380046 | - | 2427 | WP_000041646.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDX07_RS11570 (2380245) | 2380245..2380550 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDX07_RS11575 (2380658) | 2380658..2381368 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDX07_RS11580 (2381371) | 2381371..2381931 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDX07_RS11585 (2381966) | 2381966..2382307 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDX07_RS11590 (2382442) | 2382442..2382768 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDX07_RS11595 (2382974) | 2382974..2384188 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDX07_RS11600 (2384200) | 2384200..2385219 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDX07_RS11605 (2385407) | 2385407..2386687 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDX07_RS11610 (2386722) | 2386722..2386973 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDX07_RS11615 (2387046) | 2387046..2389517 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDX07_RS11620 (2389610) | 2389610..2389801 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDX07_RS11625 (2389798) | 2389798..2389986 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDX07_RS11630 (2390554) | 2390554..2390772 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDX07_RS11635 (2390802) | 2390802..2390930 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDX07_RS11640 (2390932) | 2390932..2391087 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDX07_RS11645 (2391254) | 2391254..2391661 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDX07_RS11650 (2391745) | 2391745..2391975 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDX07_RS11655 (2391959) | 2391959..2392144 | + | 186 | Protein_2278 | hypothetical protein | - |
| QDX07_RS11660 (2392142) | 2392142..2392282 | + | 141 | Protein_2279 | DUF977 family protein | - |
| QDX07_RS11665 (2392279) | 2392279..2392768 | + | 490 | Protein_2280 | class I SAM-dependent methyltransferase | - |
| QDX07_RS11670 (2393246) | 2393246..2393667 | + | 422 | Protein_2281 | hypothetical protein | - |
| QDX07_RS11675 (2394323) | 2394323..2395345 | + | 1023 | Protein_2282 | ISNCY family transposase ISCARN112 | Transposase |
| QDX07_RS11680 (2395466) | 2395466..2395615 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX07_RS11685 (2396077) | 2396077..2396409 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX07_RS11690 (2396612) | 2396612..2396917 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX07_RS11695 (2396942) | 2396942..2397181 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX07_RS11700 (2397181) | 2397181..2397468 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX07_RS11705 (2397540) | 2397540..2397695 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX07_RS11710 (2397912) | 2397912..2398163 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDX07_RS11715 (2398230) | 2398230..2398508 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDX07_RS11720 (2398510) | 2398510..2399559 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDX07_RS11725 (2399573) | 2399573..2400325 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDX07_RS11730 (2400603) | 2400603..2400692 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDX07_RS11735 (2400747) | 2400747..2400959 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDX07_RS11740 (2401260) | 2401260..2401475 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDX07_RS11745 (2401839) | 2401839..2402009 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDX07_RS11750 (2402229) | 2402229..2402444 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDX07_RS11755 (2402449) | 2402449..2402760 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDX07_RS11760 (2402757) | 2402757..2403290 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDX07_RS11765 (2403287) | 2403287..2403784 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDX07_RS11770 (2404146) | 2404146..2404358 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDX07_RS11775 (2404369) | 2404369..2404557 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDX07_RS11780 (2404560) | 2404560..2404625 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDX07_RS11785 (2404630) | 2404630..2404860 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDX07_RS11790 (2405032) | 2405032..2405205 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDX07_RS11795 (2405357) | 2405357..2405767 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDX07_RS11800 (2405825) | 2405825..2406058 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDX07_RS11805 (2406447) | 2406447..2406992 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDX07_RS11810 (2406967) | 2406967..2408448 | + | 1482 | Protein_2309 | phage terminase large subunit family protein | - |
| QDX07_RS11815 (2408729) | 2408729..2410267 | + | 1539 | Protein_2310 | tail fiber protein | - |
| QDX07_RS11820 (2410267) | 2410267..2410842 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDX07_RS11825 (2410940) | 2410940..2411530 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX07_RS11830 (2411847) | 2411847..2412080 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX07_RS11835 (2412149) | 2412149..2412262 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX07_RS11840 (2412866) | 2412866..2414149 | + | 1284 | Protein_2315 | MHS family MFS transporter YdfJ | - |
| QDX07_RS11845 (2414239) | 2414239..2415699 | + | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| QDX07_RS11850 (2415735) | 2415735..2415938 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDX07_RS11855 (2416115) | 2416115..2416801 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX07_RS11860 (2416890) | 2416890..2417636 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|