MGE detailed information
MGE type: Prophage MGE length: 31039 bp
Accession: NZ_CP122880 Location: 2507425..2538463 Organism: Escherichia coli strain ETEC1716 Replicon: chromosome
Accession: NZ_CP122880 Location: 2507425..2538463 Organism: Escherichia coli strain ETEC1716 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX09_RS12450 (2502676) | 2502676..2503386 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDX09_RS12455 (2503389) | 2503389..2503949 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDX09_RS12460 (2503984) | 2503984..2504325 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDX09_RS12465 (2504460) | 2504460..2504786 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDX09_RS12470 (2504992) | 2504992..2506206 | + | 1215 | WP_001372512.1 | starvation-sensing protein RspA | - |
| QDX09_RS12475 (2506218) | 2506218..2507237 | + | 1020 | WP_242372322.1 | Zn-dependent oxidoreductase | - |
| QDX09_RS12480 (2507425) | 2507425..2508705 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDX09_RS12485 (2508740) | 2508740..2508991 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDX09_RS12490 (2509064) | 2509064..2511046 | - | 1983 | Protein_2445 | 3'-5' exoribonuclease | - |
| QDX09_RS12495 (2511036) | 2511036..2511287 | + | 252 | Protein_2446 | DUF977 family protein | - |
| QDX09_RS12500 (2511284) | 2511284..2511773 | + | 490 | Protein_2447 | SAM-dependent methyltransferase | - |
| QDX09_RS12505 (2512251) | 2512251..2512672 | + | 422 | Protein_2448 | hypothetical protein | - |
| QDX09_RS12510 (2513328) | 2513328..2514350 | + | 1023 | Protein_2449 | ISNCY family transposase ISCARN112 | Transposase |
| QDX09_RS12515 (2514471) | 2514471..2514620 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX09_RS12520 (2515057) | 2515057..2515389 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX09_RS12525 (2515592) | 2515592..2515897 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX09_RS12530 (2515922) | 2515922..2516161 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX09_RS12535 (2516161) | 2516161..2516448 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX09_RS12540 (2516520) | 2516520..2516675 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX09_RS12545 (2516892) | 2516892..2517143 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDX09_RS12550 (2517210) | 2517210..2517488 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDX09_RS12555 (2517490) | 2517490..2518539 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QDX09_RS12560 (2518553) | 2518553..2519305 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDX09_RS12565 (2519583) | 2519583..2519672 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDX09_RS12570 (2519727) | 2519727..2519939 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDX09_RS12575 (2520240) | 2520240..2520455 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDX09_RS12580 (2520819) | 2520819..2520974 | - | 156 | Protein_2463 | YnfU family zinc-binding protein | - |
| QDX09_RS12585 (2521198) | 2521198..2521413 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDX09_RS12590 (2521418) | 2521418..2521729 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDX09_RS12595 (2521726) | 2521726..2522259 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDX09_RS12600 (2522256) | 2522256..2522753 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDX09_RS12605 (2523115) | 2523115..2523327 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDX09_RS12610 (2523338) | 2523338..2523526 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDX09_RS12615 (2523529) | 2523529..2523594 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDX09_RS12620 (2523599) | 2523599..2523829 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDX09_RS12625 (2524001) | 2524001..2524174 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDX09_RS12630 (2524326) | 2524326..2524736 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDX09_RS12635 (2524794) | 2524794..2525027 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDX09_RS12640 (2525416) | 2525416..2525961 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| QDX09_RS12645 (2525936) | 2525936..2526181 | + | 246 | Protein_2476 | phage terminase large subunit family protein | - |
| QDX09_RS12650 (2526171) | 2526171..2526317 | + | 147 | Protein_2477 | phage minor tail protein L | - |
| QDX09_RS12655 (2526316) | 2526316..2527386 | + | 1071 | Protein_2478 | phage tail protein | - |
| QDX09_RS12660 (2527473) | 2527473..2527685 | + | 213 | Protein_2479 | hypothetical protein | - |
| QDX09_RS12665 (2527685) | 2527685..2528260 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| QDX09_RS12670 (2528358) | 2528358..2528948 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX09_RS12675 (2529265) | 2529265..2529498 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX09_RS12680 (2529567) | 2529567..2529680 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX09_RS12685 (2530283) | 2530283..2531566 | + | 1284 | Protein_2484 | MHS family MFS transporter YdfJ | - |
| QDX09_RS12690 (2531655) | 2531655..2533115 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| QDX09_RS12695 (2533150) | 2533150..2533353 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDX09_RS12700 (2533530) | 2533530..2534216 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX09_RS12705 (2534305) | 2534305..2535051 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| QDX09_RS12710 (2535188) | 2535188..2537233 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| QDX09_RS12715 (2537277) | 2537277..2537795 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| QDX09_RS12720 (2538071) | 2538071..2538463 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QDX09_RS12725 (2538718) | 2538718..2539608 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| QDX09_RS12730 (2539723) | 2539723..2539827 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QDX09_RS12735 (2539827) | 2539827..2539922 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QDX09_RS12740 (2540049) | 2540049..2541236 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| QDX09_RS12745 (2541431) | 2541431..2542330 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| QDX09_RS12750 (2542361) | 2542361..2542579 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| QDX09_RS12755 (2542611) | 2542611..2542994 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| QDX09_RS12760 (2543014) | 2543014..2543448 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|