MGE detailed information
MGE type: Prophage MGE length: 58009 bp
Accession: NZ_CP122844 Location: 2299571..2357579 Organism: Escherichia coli strain ETEC1722 Replicon: chromosome
Accession: NZ_CP122844 Location: 2299571..2357579 Organism: Escherichia coli strain ETEC1722 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX00_RS11225 (2294980) | 2294980..2295321 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDX00_RS11230 (2295456) | 2295456..2295782 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDX00_RS11235 (2295988) | 2295988..2297202 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDX00_RS11240 (2297214) | 2297214..2297543 | + | 330 | Protein_2198 | alcohol dehydrogenase catalytic domain-containing protein | - |
| QDX00_RS11245 (2297688) | 2297688..2298668 | - | 981 | WP_000019402.1 | IS5-like element IS5 family transposase | - |
| QDX00_RS11250 (2298737) | 2298737..2299432 | + | 696 | Protein_2200 | Zn-dependent oxidoreductase | - |
| QDX00_RS11255 (2299571) | 2299571..2300268 | + | 698 | WP_282835936.1 | IS1 family transposase | - |
| QDX00_RS11260 (2300285) | 2300285..2300536 | + | 252 | Protein_2202 | DUF977 family protein | - |
| QDX00_RS11265 (2300533) | 2300533..2301022 | + | 490 | Protein_2203 | class I SAM-dependent methyltransferase | - |
| QDX00_RS11270 (2301500) | 2301500..2301921 | + | 422 | Protein_2204 | hypothetical protein | - |
| QDX00_RS11275 (2302577) | 2302577..2303599 | + | 1023 | Protein_2205 | ISNCY family transposase ISCARN112 | Transposase |
| QDX00_RS11280 (2303720) | 2303720..2303869 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX00_RS11285 (2304306) | 2304306..2304638 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX00_RS11290 (2304841) | 2304841..2305146 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX00_RS11295 (2305171) | 2305171..2305410 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX00_RS11300 (2305410) | 2305410..2305697 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX00_RS11305 (2305769) | 2305769..2305924 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX00_RS11310 (2306141) | 2306141..2306392 | + | 252 | WP_000980999.1 | protein Rem | - |
| QDX00_RS11315 (2306459) | 2306459..2306737 | + | 279 | WP_023147795.1 | hypothetical protein | - |
| QDX00_RS11320 (2306739) | 2306739..2307788 | + | 1050 | WP_196010922.1 | DUF968 domain-containing protein | - |
| QDX00_RS11325 (2307806) | 2307806..2308183 | + | 378 | WP_196010923.1 | antiterminator Q family protein | - |
| QDX00_RS11330 (2308339) | 2308339..2308863 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| QDX00_RS11335 (2309056) | 2309056..2310015 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| QDX00_RS11340 (2310422) | 2310422..2311135 | + | 714 | WP_024168019.1 | HTH-type transcriptional regulator GadW | VF |
| QDX00_RS11345 (2311326) | 2311326..2311541 | + | 216 | WP_000839587.1 | phage lysis protein EssD | - |
| QDX00_RS11350 (2311546) | 2311546..2311890 | + | 345 | WP_000192451.1 | YdfR family protein | - |
| QDX00_RS11355 (2311856) | 2311856..2312128 | - | 273 | WP_000370545.1 | hypothetical protein | - |
| QDX00_RS11360 (2312234) | 2312234..2312776 | + | 543 | WP_001101168.1 | lysozyme | - |
| QDX00_RS11365 (2312773) | 2312773..2313309 | + | 537 | WP_000700651.1 | hypothetical protein | - |
| QDX00_RS11370 (2313478) | 2313478..2314170 | - | 693 | WP_000085744.1 | hypothetical protein | - |
| QDX00_RS11375 (2314742) | 2314742..2315236 | + | 495 | WP_097737430.1 | DUF1441 family protein | - |
| QDX00_RS11380 (2315236) | 2315236..2317338 | + | 2103 | WP_023909761.1 | phage terminase large subunit family protein | - |
| QDX00_RS11385 (2317335) | 2317335..2317547 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| QDX00_RS11390 (2317475) | 2317475..2319055 | + | 1581 | WP_023908451.1 | phage portal protein | - |
| QDX00_RS11395 (2319000) | 2319000..2321027 | + | 2028 | WP_001533272.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDX00_RS11400 (2321114) | 2321114..2321437 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| QDX00_RS11405 (2321430) | 2321430..2321705 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDX00_RS11410 (2321717) | 2321717..2322295 | + | 579 | WP_097737431.1 | phage tail protein | - |
| QDX00_RS11415 (2322292) | 2322292..2322651 | + | 360 | WP_105462269.1 | phage minor tail U family protein | - |
| QDX00_RS11420 (2322704) | 2322704..2323447 | + | 744 | WP_001533270.1 | phage tail protein | - |
| QDX00_RS11425 (2323508) | 2323508..2323894 | + | 387 | WP_001564671.1 | phage minor tail protein G | - |
| QDX00_RS11430 (2323903) | 2323903..2324232 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDX00_RS11435 (2324204) | 2324204..2327269 | + | 3066 | WP_196010924.1 | phage tail tape measure protein | - |
| QDX00_RS11440 (2327269) | 2327269..2327598 | + | 330 | WP_000447253.1 | phage tail protein | - |
| QDX00_RS11445 (2327608) | 2327608..2328306 | + | 699 | WP_001533266.1 | phage minor tail protein L | - |
| QDX00_RS11450 (2328312) | 2328312..2329056 | + | 745 | Protein_2240 | C40 family peptidase | - |
| QDX00_RS11455 (2328954) | 2328954..2329601 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| QDX00_RS11460 (2329662) | 2329662..2333075 | + | 3414 | WP_047621258.1 | host specificity protein J | - |
| QDX00_RS11465 (2333146) | 2333146..2333745 | + | 600 | WP_001230523.1 | Outer membrane protein X | VF |
| QDX00_RS11470 (2333810) | 2333810..2336773 | + | 2964 | WP_001533262.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDX00_RS11475 (2336773) | 2336773..2337348 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| QDX00_RS11480 (2337446) | 2337446..2338036 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX00_RS11485 (2338353) | 2338353..2338586 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX00_RS11490 (2338655) | 2338655..2338768 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX00_RS11495 (2339372) | 2339372..2340655 | + | 1284 | Protein_2249 | MHS family MFS transporter YdfJ | - |
| QDX00_RS11500 (2340744) | 2340744..2342204 | + | 1461 | WP_063091469.1 | mannitol dehydrogenase family protein | - |
| QDX00_RS11505 (2342239) | 2342239..2342442 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDX00_RS11510 (2342619) | 2342619..2343305 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX00_RS11515 (2343394) | 2343394..2344140 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| QDX00_RS11520 (2344277) | 2344277..2346322 | + | 2046 | WP_097740727.1 | peptidyl-dipeptidase Dcp | - |
| QDX00_RS11525 (2346366) | 2346366..2346884 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| QDX00_RS11530 (2347162) | 2347162..2347554 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QDX00_RS11535 (2347809) | 2347809..2348699 | + | 891 | WP_000592802.1 | diguanylate cyclase DgcZ | - |
| QDX00_RS11540 (2348814) | 2348814..2348918 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QDX00_RS11545 (2348918) | 2348918..2349013 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QDX00_RS11550 (2349140) | 2349140..2350327 | - | 1188 | WP_001054175.1 | efflux MFS transporter YdeE | - |
| QDX00_RS11555 (2350522) | 2350522..2351421 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| QDX00_RS11560 (2351452) | 2351452..2351670 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| QDX00_RS11565 (2351702) | 2351702..2352085 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| QDX00_RS11570 (2352106) | 2352106..2352540 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QDX00_RS11575 (2352760) | 2352760..2353080 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDX00_RS11580 (2353070) | 2353070..2353354 | + | 285 | WP_000268704.1 | helix-turn-helix transcriptional regulator | - |
| QDX00_RS11585 (2353475) | 2353475..2354140 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QDX00_RS11590 (2354165) | 2354165..2355355 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| QDX00_RS11595 (2355505) | 2355505..2356620 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| QDX00_RS11600 (2356698) | 2356698..2357579 | - | 882 | WP_097740724.1 | HTH-type transcriptional regulator GltR | VF |
| QDX00_RS11605 (2357680) | 2357680..2359068 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| QDX00_RS11610 (2359132) | 2359132..2360058 | + | 927 | WP_000257409.1 | glutaminase B | - |
| QDX00_RS11615 (2360058) | 2360058..2360417 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| QDX00_RS11620 (2360556) | 2360556..2361974 | + | 1419 | Protein_2274 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|