MGE detailed information
MGE type: Prophage MGE length: 67685 bp
Accession: NZ_CP122801 Location: 2536497..2604181 Organism: Escherichia coli strain ETEC1734 Replicon: chromosome
Accession: NZ_CP122801 Location: 2536497..2604181 Organism: Escherichia coli strain ETEC1734 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX84_RS12600 (2532396) | 2532396..2533616 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| QDX84_RS12605 (2533741) | 2533741..2534436 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| QDX84_RS12610 (2534389) | 2534389..2535681 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDX84_RS12615 (2535840) | 2535840..2536454 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| QDX84_RS12620 (2536497) | 2536497..2537351 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDX84_RS12625 (2537353) | 2537353..2537970 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QDX84_RS12630 (2537981) | 2537981..2540404 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDX84_RS12635 (2540465) | 2540465..2541574 | - | 1110 | WP_077785974.1 | molybdopterin dinucleotide binding domain-containing protein | - |
| QDX84_RS12640 (2541800) | 2541800..2543158 | + | 1359 | WP_282835435.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QDX84_RS12645 (2543529) | 2543529..2544029 | + | 501 | WP_001548580.1 | hypothetical protein | - |
| QDX84_RS12650 (2544650) | 2544650..2545408 | + | 759 | WP_000107258.1 | KilA-N domain-containing protein | - |
| QDX84_RS12655 (2545410) | 2545410..2545607 | + | 198 | WP_282835436.1 | hypothetical protein | - |
| QDX84_RS12660 (2545718) | 2545718..2546209 | + | 492 | WP_075699659.1 | hypothetical protein | - |
| QDX84_RS12665 (2546294) | 2546294..2547283 | + | 990 | WP_152639259.1 | hypothetical protein | - |
| QDX84_RS12670 (2548042) | 2548042..2549454 | - | 1413 | Protein_2475 | molybdopterin-dependent oxidoreductase | - |
| QDX84_RS12675 (2549653) | 2549653..2549958 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QDX84_RS12680 (2550066) | 2550066..2550776 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDX84_RS12685 (2550779) | 2550779..2551339 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDX84_RS12690 (2551374) | 2551374..2551715 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDX84_RS12695 (2551850) | 2551850..2552176 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDX84_RS12700 (2552382) | 2552382..2553596 | + | 1215 | WP_089678775.1 | starvation-sensing protein RspA | - |
| QDX84_RS12705 (2553608) | 2553608..2554627 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QDX84_RS12710 (2554815) | 2554815..2556095 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDX84_RS12715 (2556130) | 2556130..2556381 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDX84_RS12720 (2556454) | 2556454..2558925 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDX84_RS12725 (2559018) | 2559018..2559209 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| QDX84_RS12730 (2559206) | 2559206..2559394 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDX84_RS12735 (2559962) | 2559962..2560180 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDX84_RS12740 (2560210) | 2560210..2560338 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDX84_RS12745 (2560340) | 2560340..2560495 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDX84_RS12750 (2560662) | 2560662..2561069 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDX84_RS12755 (2561153) | 2561153..2561383 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDX84_RS12760 (2561367) | 2561367..2561888 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| QDX84_RS12765 (2561869) | 2561869..2562834 | + | 966 | WP_122986298.1 | hypothetical protein | - |
| QDX84_RS12770 (2562875) | 2562875..2563297 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QDX84_RS12775 (2563294) | 2563294..2563783 | + | 490 | Protein_2496 | class I SAM-dependent methyltransferase | - |
| QDX84_RS12780 (2563913) | 2563913..2564095 | + | 183 | Protein_2497 | hypothetical protein | - |
| QDX84_RS12785 (2564261) | 2564261..2564682 | + | 422 | Protein_2498 | hypothetical protein | - |
| QDX84_RS12790 (2565338) | 2565338..2566360 | + | 1023 | Protein_2499 | ISNCY family transposase ISCARN112 | Transposase |
| QDX84_RS12795 (2566481) | 2566481..2566630 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX84_RS12800 (2567067) | 2567067..2567399 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX84_RS12805 (2567602) | 2567602..2567907 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX84_RS12810 (2567932) | 2567932..2568171 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX84_RS12815 (2568171) | 2568171..2568458 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX84_RS12820 (2568530) | 2568530..2568685 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX84_RS12825 (2568902) | 2568902..2569153 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDX84_RS12830 (2569220) | 2569220..2569498 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDX84_RS12835 (2569500) | 2569500..2570549 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QDX84_RS12840 (2570563) | 2570563..2571315 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDX84_RS12845 (2571593) | 2571593..2571682 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDX84_RS12850 (2571737) | 2571737..2571949 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDX84_RS12855 (2572249) | 2572249..2572464 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDX84_RS12860 (2572828) | 2572828..2572998 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDX84_RS12865 (2573218) | 2573218..2573433 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDX84_RS12870 (2573438) | 2573438..2573749 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDX84_RS12875 (2573746) | 2573746..2574279 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDX84_RS12880 (2574276) | 2574276..2574773 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDX84_RS12885 (2575135) | 2575135..2575347 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDX84_RS12890 (2575358) | 2575358..2575546 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDX84_RS12895 (2575549) | 2575549..2575614 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDX84_RS12900 (2575619) | 2575619..2575849 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDX84_RS12905 (2576021) | 2576021..2576194 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDX84_RS12910 (2576346) | 2576346..2576756 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDX84_RS12915 (2576814) | 2576814..2577047 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDX84_RS12920 (2577436) | 2577436..2577981 | + | 546 | WP_021575143.1 | DNA-packaging protein | - |
| QDX84_RS12925 (2577956) | 2577956..2579881 | + | 1926 | WP_282835437.1 | phage terminase large subunit family protein | - |
| QDX84_RS12930 (2579878) | 2579878..2580084 | + | 207 | WP_000198149.1 | gpW family protein | - |
| QDX84_RS12935 (2580081) | 2580081..2581682 | + | 1602 | WP_001529148.1 | phage portal protein | - |
| QDX84_RS12940 (2581663) | 2581663..2582982 | + | 1320 | WP_161399002.1 | S49 family peptidase | - |
| QDX84_RS12945 (2582992) | 2582992..2583324 | + | 333 | WP_012304872.1 | head decoration protein | - |
| QDX84_RS12950 (2583380) | 2583380..2584405 | + | 1026 | WP_053266588.1 | major capsid protein | - |
| QDX84_RS12955 (2584447) | 2584447..2584845 | + | 399 | WP_023281240.1 | DNA-packaging protein FI | - |
| QDX84_RS12960 (2584857) | 2584857..2585210 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| QDX84_RS12965 (2585222) | 2585222..2585800 | + | 579 | WP_000975075.1 | phage tail protein | - |
| QDX84_RS12970 (2585797) | 2585797..2586192 | + | 396 | WP_000683142.1 | phage minor tail U family protein | - |
| QDX84_RS12975 (2586200) | 2586200..2586940 | + | 741 | WP_001358372.1 | phage tail protein | - |
| QDX84_RS12980 (2586956) | 2586956..2587378 | + | 423 | WP_021553622.1 | phage minor tail protein G | - |
| QDX84_RS12985 (2587375) | 2587375..2587794 | + | 420 | WP_032139867.1 | phage tail assembly protein T | - |
| QDX84_RS12990 (2587787) | 2587787..2590366 | + | 2580 | WP_023281238.1 | phage tail tape measure protein | - |
| QDX84_RS12995 (2590363) | 2590363..2590692 | + | 330 | WP_000847331.1 | phage tail protein | - |
| QDX84_RS13000 (2590692) | 2590692..2591390 | + | 699 | WP_021553457.1 | phage minor tail protein L | - |
| QDX84_RS13005 (2591396) | 2591396..2592139 | + | 744 | WP_032143059.1 | C40 family peptidase | - |
| QDX84_RS13010 (2592076) | 2592076..2592678 | + | 603 | WP_000090905.1 | tail assembly protein | - |
| QDX84_RS13015 (2592739) | 2592739..2596218 | + | 3480 | WP_097558715.1 | host specificity protein J | - |
| QDX84_RS13020 (2596286) | 2596286..2596885 | + | 600 | WP_023281236.1 | Outer membrane protein X | VF |
| QDX84_RS13025 (2596950) | 2596950..2600300 | + | 3351 | WP_282835438.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDX84_RS13030 (2600300) | 2600300..2600875 | + | 576 | WP_000885634.1 | tail fiber assembly protein | - |
| QDX84_RS13035 (2600973) | 2600973..2601563 | - | 591 | WP_000086531.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX84_RS13040 (2601880) | 2601880..2602113 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX84_RS13045 (2602182) | 2602182..2602295 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX84_RS13050 (2602898) | 2602898..2604181 | + | 1284 | Protein_2551 | MHS family MFS transporter YdfJ | - |
| QDX84_RS13055 (2604270) | 2604270..2605730 | + | 1461 | WP_282835439.1 | mannitol dehydrogenase family protein | - |
| QDX84_RS13060 (2605765) | 2605765..2605968 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDX84_RS13065 (2606145) | 2606145..2606831 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX84_RS13070 (2606920) | 2606920..2607666 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|