MGE detailed information
MGE type: Prophage MGE length: 70913 bp
Accession: NZ_CP122758 Location: 2327959..2398871 Organism: Escherichia coli strain ETEC1739 Replicon: chromosome
Accession: NZ_CP122758 Location: 2327959..2398871 Organism: Escherichia coli strain ETEC1739 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW95_RS11465 (2323858) | 2323858..2325078 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| QDW95_RS11470 (2325203) | 2325203..2325898 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| QDW95_RS11475 (2325851) | 2325851..2327143 | - | 1293 | WP_196010830.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDW95_RS11480 (2327302) | 2327302..2327916 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| QDW95_RS11485 (2327959) | 2327959..2328813 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDW95_RS11490 (2328815) | 2328815..2329432 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QDW95_RS11495 (2329443) | 2329443..2331866 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW95_RS11500 (2331927) | 2331927..2334353 | - | 2427 | WP_000041674.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW95_RS11505 (2334552) | 2334552..2334857 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QDW95_RS11510 (2334965) | 2334965..2335675 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDW95_RS11515 (2335678) | 2335678..2336238 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDW95_RS11520 (2336273) | 2336273..2336614 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDW95_RS11525 (2336749) | 2336749..2337075 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDW95_RS11530 (2337281) | 2337281..2338495 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW95_RS11535 (2338507) | 2338507..2338836 | + | 330 | Protein_2256 | alcohol dehydrogenase catalytic domain-containing protein | - |
| QDW95_RS11540 (2338981) | 2338981..2339961 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| QDW95_RS11545 (2340030) | 2340030..2340725 | + | 696 | Protein_2258 | Zn-dependent oxidoreductase | - |
| QDW95_RS11550 (2340864) | 2340864..2341561 | + | 698 | WP_282835936.1 | IS1 family transposase | - |
| QDW95_RS11555 (2341578) | 2341578..2341829 | + | 252 | Protein_2260 | DUF977 family protein | - |
| QDW95_RS11560 (2341826) | 2341826..2342315 | + | 490 | Protein_2261 | class I SAM-dependent methyltransferase | - |
| QDW95_RS11565 (2342793) | 2342793..2343214 | + | 422 | Protein_2262 | hypothetical protein | - |
| QDW95_RS11570 (2343870) | 2343870..2344892 | + | 1023 | Protein_2263 | ISNCY family transposase ISCARN112 | Transposase |
| QDW95_RS11575 (2345013) | 2345013..2345162 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW95_RS11580 (2345599) | 2345599..2345931 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW95_RS11585 (2346134) | 2346134..2346439 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDW95_RS11590 (2346464) | 2346464..2346703 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW95_RS11595 (2346703) | 2346703..2346990 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW95_RS11600 (2347062) | 2347062..2347217 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW95_RS11605 (2347434) | 2347434..2347685 | + | 252 | WP_000980999.1 | protein Rem | - |
| QDW95_RS11610 (2347752) | 2347752..2348030 | + | 279 | WP_023147795.1 | hypothetical protein | - |
| QDW95_RS11615 (2348032) | 2348032..2349081 | + | 1050 | WP_196010922.1 | DUF968 domain-containing protein | - |
| QDW95_RS11620 (2349099) | 2349099..2349476 | + | 378 | WP_196010923.1 | antiterminator Q family protein | - |
| QDW95_RS11625 (2349632) | 2349632..2350156 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| QDW95_RS11630 (2350349) | 2350349..2351308 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| QDW95_RS11635 (2351715) | 2351715..2352428 | + | 714 | WP_024168019.1 | HTH-type transcriptional regulator GadW | VF |
| QDW95_RS11640 (2352619) | 2352619..2352834 | + | 216 | WP_000839587.1 | phage lysis protein EssD | - |
| QDW95_RS11645 (2352839) | 2352839..2353183 | + | 345 | WP_000192451.1 | YdfR family protein | - |
| QDW95_RS11650 (2353149) | 2353149..2353421 | - | 273 | WP_000370545.1 | hypothetical protein | - |
| QDW95_RS11655 (2353527) | 2353527..2354069 | + | 543 | WP_001101168.1 | lysozyme | - |
| QDW95_RS11660 (2354066) | 2354066..2354602 | + | 537 | WP_000700651.1 | hypothetical protein | - |
| QDW95_RS11665 (2354771) | 2354771..2355463 | - | 693 | WP_000085744.1 | hypothetical protein | - |
| QDW95_RS11670 (2356035) | 2356035..2356529 | + | 495 | WP_097737430.1 | DUF1441 family protein | - |
| QDW95_RS11675 (2356529) | 2356529..2358631 | + | 2103 | WP_023909761.1 | phage terminase large subunit family protein | - |
| QDW95_RS11680 (2358628) | 2358628..2358840 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| QDW95_RS11685 (2358768) | 2358768..2360348 | + | 1581 | WP_023908451.1 | phage portal protein | - |
| QDW95_RS11690 (2360293) | 2360293..2362320 | + | 2028 | WP_001533272.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDW95_RS11695 (2362407) | 2362407..2362730 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| QDW95_RS11700 (2362723) | 2362723..2362998 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDW95_RS11705 (2363010) | 2363010..2363588 | + | 579 | WP_097737431.1 | phage tail protein | - |
| QDW95_RS11710 (2363585) | 2363585..2363944 | + | 360 | WP_105462269.1 | phage minor tail U family protein | - |
| QDW95_RS11715 (2363997) | 2363997..2364740 | + | 744 | WP_001533270.1 | phage tail protein | - |
| QDW95_RS11720 (2364801) | 2364801..2365187 | + | 387 | WP_001564671.1 | phage minor tail protein G | - |
| QDW95_RS11725 (2365196) | 2365196..2365525 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDW95_RS11730 (2365497) | 2365497..2368562 | + | 3066 | WP_196010924.1 | phage tail tape measure protein | - |
| QDW95_RS11735 (2368562) | 2368562..2368891 | + | 330 | WP_000447253.1 | phage tail protein | - |
| QDW95_RS11740 (2368901) | 2368901..2369599 | + | 699 | WP_001533266.1 | phage minor tail protein L | - |
| QDW95_RS11745 (2369605) | 2369605..2370348 | + | 744 | WP_032157901.1 | C40 family peptidase | - |
| QDW95_RS11750 (2370246) | 2370246..2370893 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| QDW95_RS11755 (2370954) | 2370954..2374367 | + | 3414 | WP_047621258.1 | host specificity protein J | - |
| QDW95_RS11760 (2374438) | 2374438..2375037 | + | 600 | WP_001230523.1 | Outer membrane protein X | VF |
| QDW95_RS11765 (2375102) | 2375102..2378065 | + | 2964 | WP_001533262.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW95_RS11770 (2378065) | 2378065..2378640 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| QDW95_RS11775 (2378738) | 2378738..2379328 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW95_RS11780 (2379645) | 2379645..2379878 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW95_RS11785 (2379947) | 2379947..2380060 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW95_RS11790 (2380664) | 2380664..2381947 | + | 1284 | Protein_2307 | MHS family MFS transporter YdfJ | - |
| QDW95_RS11795 (2382036) | 2382036..2383496 | + | 1461 | WP_222698126.1 | mannitol dehydrogenase family protein | - |
| QDW95_RS11800 (2383531) | 2383531..2383734 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDW95_RS11805 (2383911) | 2383911..2384597 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDW95_RS11810 (2384686) | 2384686..2385432 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| QDW95_RS11815 (2385569) | 2385569..2387614 | + | 2046 | WP_097740727.1 | peptidyl-dipeptidase Dcp | - |
| QDW95_RS11820 (2387658) | 2387658..2388176 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| QDW95_RS11825 (2388454) | 2388454..2388846 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QDW95_RS11830 (2389101) | 2389101..2389991 | + | 891 | WP_000592802.1 | diguanylate cyclase DgcZ | - |
| QDW95_RS11835 (2390106) | 2390106..2390210 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QDW95_RS11840 (2390210) | 2390210..2390305 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QDW95_RS11845 (2390432) | 2390432..2391619 | - | 1188 | WP_001054175.1 | efflux MFS transporter YdeE | - |
| QDW95_RS11850 (2391814) | 2391814..2392713 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| QDW95_RS11855 (2392744) | 2392744..2392962 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| QDW95_RS11860 (2392994) | 2392994..2393377 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| QDW95_RS11865 (2393398) | 2393398..2393832 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QDW95_RS11870 (2394052) | 2394052..2394372 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW95_RS11875 (2394362) | 2394362..2394646 | + | 285 | WP_000268704.1 | helix-turn-helix transcriptional regulator | - |
| QDW95_RS11880 (2394767) | 2394767..2395432 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QDW95_RS11885 (2395457) | 2395457..2396647 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| QDW95_RS11890 (2396797) | 2396797..2397912 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| QDW95_RS11895 (2397990) | 2397990..2398871 | - | 882 | WP_097740724.1 | HTH-type transcriptional regulator GltR | VF |
| QDW95_RS11900 (2398972) | 2398972..2400360 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| QDW95_RS11905 (2400424) | 2400424..2401350 | + | 927 | WP_000257409.1 | glutaminase B | - |
| QDW95_RS11910 (2401350) | 2401350..2401709 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| QDW95_RS11915 (2401848) | 2401848..2403266 | + | 1419 | Protein_2332 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|