MGE detailed information
MGE type: Prophage MGE length: 49367 bp
Accession: NZ_CP122681 Location: 2432279..2481645 Organism: Escherichia coli strain ETEC4068 Replicon: chromosome
Accession: NZ_CP122681 Location: 2432279..2481645 Organism: Escherichia coli strain ETEC4068 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW67_RS11845 (2428528) | 2428528..2430954 | - | 2427 | WP_000041646.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW67_RS11850 (2431153) | 2431153..2431458 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDW67_RS11855 (2431566) | 2431566..2432276 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDW67_RS11860 (2432279) | 2432279..2432839 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDW67_RS11865 (2432874) | 2432874..2433215 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDW67_RS11870 (2433350) | 2433350..2433676 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDW67_RS11875 (2433882) | 2433882..2435096 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW67_RS11880 (2435108) | 2435108..2436127 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDW67_RS11885 (2436315) | 2436315..2437595 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| QDW67_RS11890 (2437630) | 2437630..2437881 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW67_RS11895 (2437954) | 2437954..2440425 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDW67_RS11900 (2440518) | 2440518..2440709 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDW67_RS11905 (2440706) | 2440706..2440894 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW67_RS11910 (2441462) | 2441462..2441680 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDW67_RS11915 (2441710) | 2441710..2441838 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDW67_RS11920 (2441840) | 2441840..2441995 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDW67_RS11925 (2442162) | 2442162..2442569 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDW67_RS11930 (2442653) | 2442653..2442883 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDW67_RS11935 (2442867) | 2442867..2443052 | + | 186 | Protein_2332 | hypothetical protein | - |
| QDW67_RS11940 (2443050) | 2443050..2443190 | + | 141 | Protein_2333 | DUF977 family protein | - |
| QDW67_RS11945 (2443187) | 2443187..2443676 | + | 490 | Protein_2334 | class I SAM-dependent methyltransferase | - |
| QDW67_RS11950 (2444154) | 2444154..2444575 | + | 422 | Protein_2335 | hypothetical protein | - |
| QDW67_RS11955 (2445231) | 2445231..2446253 | + | 1023 | Protein_2336 | ISNCY family transposase ISCARN112 | Transposase |
| QDW67_RS11960 (2446374) | 2446374..2446523 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW67_RS11965 (2446985) | 2446985..2447317 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW67_RS11970 (2447520) | 2447520..2447750 | - | 231 | WP_115197876.1 | hypothetical protein | - |
| QDW67_RS11975 (2447850) | 2447850..2448089 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW67_RS11980 (2448089) | 2448089..2448376 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW67_RS11985 (2448448) | 2448448..2448603 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW67_RS11990 (2448820) | 2448820..2449071 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDW67_RS11995 (2449138) | 2449138..2449416 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW67_RS12000 (2449418) | 2449418..2450467 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDW67_RS12005 (2450481) | 2450481..2451233 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDW67_RS12010 (2451511) | 2451511..2451600 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW67_RS12015 (2451655) | 2451655..2451867 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW67_RS12020 (2452168) | 2452168..2452383 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW67_RS12025 (2452747) | 2452747..2452917 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDW67_RS12030 (2453137) | 2453137..2453352 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW67_RS12035 (2453357) | 2453357..2453668 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDW67_RS12040 (2453665) | 2453665..2454198 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDW67_RS12045 (2454195) | 2454195..2454692 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW67_RS12050 (2455055) | 2455055..2455267 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW67_RS12055 (2455278) | 2455278..2455466 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW67_RS12060 (2455469) | 2455469..2455534 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDW67_RS12065 (2455539) | 2455539..2455769 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDW67_RS12070 (2455941) | 2455941..2456114 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW67_RS12075 (2456266) | 2456266..2456676 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDW67_RS12080 (2456734) | 2456734..2456967 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDW67_RS12085 (2457356) | 2457356..2457901 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDW67_RS12090 (2457876) | 2457876..2459357 | + | 1482 | Protein_2363 | phage terminase large subunit family protein | - |
| QDW67_RS12095 (2459359) | 2459359..2461176 | + | 1818 | Protein_2364 | tail fiber protein | - |
| QDW67_RS12100 (2461176) | 2461176..2461751 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDW67_RS12105 (2461849) | 2461849..2462439 | - | 591 | WP_120145705.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW67_RS12110 (2462756) | 2462756..2462989 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW67_RS12115 (2463058) | 2463058..2463171 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW67_RS12120 (2463775) | 2463775..2465058 | + | 1284 | Protein_2369 | MHS family MFS transporter YdfJ | - |
| QDW67_RS12125 (2465148) | 2465148..2466608 | + | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| QDW67_RS12130 (2466644) | 2466644..2466847 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDW67_RS12135 (2467024) | 2467024..2467710 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDW67_RS12140 (2467799) | 2467799..2468545 | - | 747 | WP_000636575.1 | hypothetical protein | VF |
| QDW67_RS12145 (2468682) | 2468682..2470727 | + | 2046 | WP_063085278.1 | peptidyl-dipeptidase Dcp | - |
| QDW67_RS12150 (2470772) | 2470772..2470852 | - | 81 | Protein_2375 | hypothetical protein | - |
| QDW67_RS12155 (2471092) | 2471092..2471484 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QDW67_RS12160 (2471747) | 2471747..2472637 | + | 891 | WP_063085279.1 | diguanylate cyclase DgcZ | - |
| QDW67_RS12165 (2472752) | 2472752..2472856 | - | 105 | WP_212734532.1 | hypothetical protein | - |
| QDW67_RS12170 (2472856) | 2472856..2472951 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QDW67_RS12175 (2473078) | 2473078..2474265 | - | 1188 | WP_063085280.1 | efflux MFS transporter YdeE | - |
| QDW67_RS12180 (2474460) | 2474460..2475359 | + | 900 | WP_053295902.1 | O-acetylserine/cysteine exporter | - |
| QDW67_RS12185 (2475404) | 2475404..2476102 | - | 699 | WP_000577190.1 | GntR family transcriptional regulator | - |
| QDW67_RS12190 (2476301) | 2476301..2476612 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| QDW67_RS12195 (2476623) | 2476623..2476874 | - | 252 | Protein_2384 | hypothetical protein | VF |
| QDW67_RS12200 (2476895) | 2476895..2477329 | - | 435 | WP_000843422.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QDW67_RS12205 (2477541) | 2477541..2478206 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QDW67_RS12210 (2478231) | 2478231..2479421 | - | 1191 | WP_000210785.1 | L-arabinose MFS transporter | - |
| QDW67_RS12215 (2479571) | 2479571..2480686 | - | 1116 | WP_063085284.1 | putative protein YneK | - |
| QDW67_RS12220 (2480770) | 2480770..2481645 | - | 876 | WP_000366511.1 | hypothetical protein | VF |
| QDW67_RS12225 (2481746) | 2481746..2483134 | + | 1389 | WP_063085285.1 | succinate-semialdehyde dehydrogenase | - |
| QDW67_RS12230 (2483198) | 2483198..2484124 | + | 927 | WP_000257409.1 | glutaminase B | - |
| QDW67_RS12235 (2484124) | 2484124..2484483 | + | 360 | WP_001559156.1 | DUF4186 domain-containing protein | - |
| QDW67_RS12240 (2484622) | 2484622..2486040 | + | 1419 | WP_000558440.1 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|