MGE detailed information
MGE type: Prophage MGE length: 28744 bp
Accession: NZ_CP122676 Location: 2456487..2485230 Organism: Escherichia coli strain ETEC4070 Replicon: chromosome
Accession: NZ_CP122676 Location: 2456487..2485230 Organism: Escherichia coli strain ETEC4070 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW57_RS12020 (2451738) | 2451738..2452448 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDW57_RS12025 (2452451) | 2452451..2453011 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDW57_RS12030 (2453046) | 2453046..2453387 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDW57_RS12035 (2453522) | 2453522..2453848 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDW57_RS12040 (2454054) | 2454054..2455268 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW57_RS12045 (2455280) | 2455280..2456299 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDW57_RS12050 (2456487) | 2456487..2457767 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDW57_RS12055 (2457802) | 2457802..2458053 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW57_RS12060 (2458126) | 2458126..2460597 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDW57_RS12065 (2460690) | 2460690..2460881 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDW57_RS12070 (2460878) | 2460878..2461066 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW57_RS12075 (2461634) | 2461634..2461852 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDW57_RS12080 (2461882) | 2461882..2462010 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDW57_RS12085 (2462012) | 2462012..2462167 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDW57_RS12090 (2462334) | 2462334..2462741 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDW57_RS12095 (2462825) | 2462825..2463055 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDW57_RS12100 (2463039) | 2463039..2463224 | + | 186 | Protein_2365 | hypothetical protein | - |
| QDW57_RS12105 (2463222) | 2463222..2463362 | + | 141 | Protein_2366 | DUF977 family protein | - |
| QDW57_RS12110 (2463359) | 2463359..2463848 | + | 490 | Protein_2367 | SAM-dependent methyltransferase | - |
| QDW57_RS12115 (2464326) | 2464326..2464747 | + | 422 | Protein_2368 | hypothetical protein | - |
| QDW57_RS12120 (2465403) | 2465403..2466425 | + | 1023 | Protein_2369 | ISNCY family transposase ISCARN112 | Transposase |
| QDW57_RS12125 (2466546) | 2466546..2466695 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW57_RS12130 (2467157) | 2467157..2467489 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW57_RS12135 (2467692) | 2467692..2467997 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDW57_RS12140 (2468022) | 2468022..2468261 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW57_RS12145 (2468261) | 2468261..2468548 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW57_RS12150 (2468620) | 2468620..2468775 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW57_RS12155 (2468992) | 2468992..2469243 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDW57_RS12160 (2469310) | 2469310..2469588 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW57_RS12165 (2469590) | 2469590..2470639 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDW57_RS12170 (2470653) | 2470653..2471405 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDW57_RS12175 (2471683) | 2471683..2471772 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW57_RS12180 (2471827) | 2471827..2472039 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW57_RS12185 (2472340) | 2472340..2472555 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW57_RS12190 (2472919) | 2472919..2473089 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDW57_RS12195 (2473309) | 2473309..2473524 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW57_RS12200 (2473529) | 2473529..2473840 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDW57_RS12205 (2473837) | 2473837..2474370 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDW57_RS12210 (2474367) | 2474367..2474864 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW57_RS12215 (2475227) | 2475227..2475439 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW57_RS12220 (2475450) | 2475450..2475638 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW57_RS12225 (2475641) | 2475641..2475706 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDW57_RS12230 (2475711) | 2475711..2475941 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDW57_RS12235 (2476113) | 2476113..2476286 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW57_RS12240 (2476438) | 2476438..2476848 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDW57_RS12245 (2476906) | 2476906..2477139 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDW57_RS12250 (2477528) | 2477528..2478073 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDW57_RS12255 (2478048) | 2478048..2479529 | + | 1482 | Protein_2396 | phage terminase large subunit family protein | - |
| QDW57_RS12260 (2479531) | 2479531..2481348 | + | 1818 | Protein_2397 | tail fiber protein | - |
| QDW57_RS12265 (2481348) | 2481348..2481923 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDW57_RS12270 (2482021) | 2482021..2482611 | - | 591 | WP_192297632.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW57_RS12275 (2482928) | 2482928..2483161 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW57_RS12280 (2483230) | 2483230..2483343 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW57_RS12285 (2483947) | 2483947..2485230 | + | 1284 | Protein_2402 | MHS family MFS transporter YdfJ | - |
| QDW57_RS12290 (2485320) | 2485320..2486780 | + | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| QDW57_RS12295 (2486816) | 2486816..2487019 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDW57_RS12300 (2487196) | 2487196..2487882 | - | 687 | WP_192297634.1 | DNA-binding transcriptional regulator rspR | - |
| QDW57_RS12305 (2487971) | 2487971..2488717 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|