MGE detailed information
MGE type: Prophage MGE length: 35908 bp
Accession: NZ_CP122660 Location: 2262978..2298885 Organism: Escherichia coli strain ETEC4073 Replicon: chromosome
Accession: NZ_CP122660 Location: 2262978..2298885 Organism: Escherichia coli strain ETEC4073 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY26_RS10995 (2258877) | 2258877..2260097 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| QDY26_RS11000 (2260222) | 2260222..2260917 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| QDY26_RS11005 (2260870) | 2260870..2262162 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDY26_RS11010 (2262321) | 2262321..2262935 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| QDY26_RS11015 (2262978) | 2262978..2263832 | - | 855 | WP_046788716.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDY26_RS11020 (2263834) | 2263834..2264451 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QDY26_RS11025 (2264462) | 2264462..2266885 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDY26_RS11030 (2266946) | 2266946..2269372 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDY26_RS11035 (2269571) | 2269571..2269876 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QDY26_RS11040 (2269984) | 2269984..2270694 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDY26_RS11045 (2270697) | 2270697..2271257 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDY26_RS11050 (2271292) | 2271292..2271633 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDY26_RS11055 (2271768) | 2271768..2272094 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDY26_RS11060 (2272300) | 2272300..2273514 | + | 1215 | WP_001372512.1 | starvation-sensing protein RspA | - |
| QDY26_RS11065 (2273526) | 2273526..2274545 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QDY26_RS11070 (2274733) | 2274733..2276013 | - | 1281 | WP_046788715.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDY26_RS11075 (2276048) | 2276048..2276299 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDY26_RS11080 (2276372) | 2276372..2278354 | - | 1983 | Protein_2163 | 3'-5' exoribonuclease | - |
| QDY26_RS11085 (2278344) | 2278344..2278595 | + | 252 | Protein_2164 | DUF977 family protein | - |
| QDY26_RS11090 (2278592) | 2278592..2279081 | + | 490 | Protein_2165 | SAM-dependent methyltransferase | - |
| QDY26_RS11095 (2279559) | 2279559..2279980 | + | 422 | Protein_2166 | hypothetical protein | - |
| QDY26_RS11100 (2280636) | 2280636..2281658 | + | 1023 | Protein_2167 | ISNCY family transposase ISCARN112 | Transposase |
| QDY26_RS11105 (2281779) | 2281779..2281928 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDY26_RS11110 (2282365) | 2282365..2282697 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDY26_RS11115 (2282900) | 2282900..2283205 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDY26_RS11120 (2283230) | 2283230..2283469 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDY26_RS11125 (2283469) | 2283469..2283756 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDY26_RS11130 (2283828) | 2283828..2283983 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY26_RS11135 (2284200) | 2284200..2284451 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDY26_RS11140 (2284518) | 2284518..2284796 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDY26_RS11145 (2284798) | 2284798..2285847 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QDY26_RS11150 (2285861) | 2285861..2286613 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDY26_RS11155 (2286891) | 2286891..2286980 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDY26_RS11160 (2287035) | 2287035..2287247 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDY26_RS11165 (2287548) | 2287548..2287763 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDY26_RS11170 (2288127) | 2288127..2288297 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDY26_RS11175 (2288517) | 2288517..2288732 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDY26_RS11180 (2288737) | 2288737..2289048 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDY26_RS11185 (2289045) | 2289045..2289578 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDY26_RS11190 (2289575) | 2289575..2290072 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDY26_RS11195 (2290434) | 2290434..2290646 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDY26_RS11200 (2290657) | 2290657..2290845 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDY26_RS11205 (2290848) | 2290848..2290913 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDY26_RS11210 (2290918) | 2290918..2291148 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDY26_RS11215 (2291320) | 2291320..2291493 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDY26_RS11220 (2291645) | 2291645..2292055 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDY26_RS11225 (2292113) | 2292113..2292346 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDY26_RS11230 (2292735) | 2292735..2293280 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| QDY26_RS11235 (2293255) | 2293255..2293500 | + | 246 | Protein_2194 | phage terminase large subunit family protein | - |
| QDY26_RS11240 (2293490) | 2293490..2293636 | + | 147 | Protein_2195 | phage minor tail protein L | - |
| QDY26_RS11245 (2293635) | 2293635..2294705 | + | 1071 | Protein_2196 | phage tail protein | - |
| QDY26_RS11250 (2294792) | 2294792..2295004 | + | 213 | Protein_2197 | hypothetical protein | - |
| QDY26_RS11255 (2295004) | 2295004..2295579 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| QDY26_RS11260 (2295677) | 2295677..2296267 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDY26_RS11265 (2296584) | 2296584..2296817 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDY26_RS11270 (2296886) | 2296886..2296999 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDY26_RS11275 (2297602) | 2297602..2298885 | + | 1284 | Protein_2202 | MHS family MFS transporter YdfJ | - |
| QDY26_RS11280 (2298974) | 2298974..2300434 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| QDY26_RS11285 (2300469) | 2300469..2300672 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDY26_RS11290 (2300849) | 2300849..2301535 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDY26_RS11295 (2301624) | 2301624..2302370 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|