MGE detailed information
MGE type: Prophage MGE length: 42287 bp
Accession: NZ_CP122652 Location: 2458251..2500537 Organism: Escherichia coli strain ETEC4075 Replicon: chromosome
Accession: NZ_CP122652 Location: 2458251..2500537 Organism: Escherichia coli strain ETEC4075 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW61_RS12045 (2454151) | 2454151..2455371 | + | 1221 | WP_096098427.1 | DNA-binding transcriptional repressor Mlc | - |
| QDW61_RS12050 (2455496) | 2455496..2456191 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| QDW61_RS12055 (2456144) | 2456144..2457436 | - | 1293 | WP_071591524.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDW61_RS12060 (2457594) | 2457594..2458208 | - | 615 | WP_063085996.1 | Tat proofreading chaperone DmsD | - |
| QDW61_RS12065 (2458251) | 2458251..2459105 | - | 855 | WP_063085994.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDW61_RS12070 (2459107) | 2459107..2459724 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QDW61_RS12075 (2459735) | 2459735..2462158 | - | 2424 | WP_074150141.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW61_RS12080 (2462219) | 2462219..2464645 | - | 2427 | WP_000041646.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW61_RS12085 (2464844) | 2464844..2465149 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDW61_RS12090 (2465257) | 2465257..2465967 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDW61_RS12095 (2465970) | 2465970..2466530 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDW61_RS12100 (2466565) | 2466565..2466906 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDW61_RS12105 (2467041) | 2467041..2467367 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDW61_RS12110 (2467573) | 2467573..2468787 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW61_RS12115 (2468799) | 2468799..2469818 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDW61_RS12120 (2470006) | 2470006..2471286 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QDW61_RS12125 (2471321) | 2471321..2471572 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW61_RS12130 (2471645) | 2471645..2474116 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDW61_RS12135 (2474209) | 2474209..2474400 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDW61_RS12140 (2474397) | 2474397..2474585 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW61_RS12145 (2475153) | 2475153..2475371 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDW61_RS12150 (2475401) | 2475401..2475529 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDW61_RS12155 (2475531) | 2475531..2475686 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDW61_RS12160 (2475853) | 2475853..2476260 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDW61_RS12165 (2476344) | 2476344..2476574 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDW61_RS12170 (2476558) | 2476558..2476743 | + | 186 | Protein_2380 | hypothetical protein | - |
| QDW61_RS12175 (2476741) | 2476741..2476881 | + | 141 | Protein_2381 | DUF977 family protein | - |
| QDW61_RS12180 (2476878) | 2476878..2477367 | + | 490 | Protein_2382 | class I SAM-dependent methyltransferase | - |
| QDW61_RS12185 (2477845) | 2477845..2478266 | + | 422 | Protein_2383 | hypothetical protein | - |
| QDW61_RS12190 (2478922) | 2478922..2479944 | + | 1023 | Protein_2384 | ISNCY family transposase ISCARN112 | Transposase |
| QDW61_RS12195 (2480065) | 2480065..2480214 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW61_RS12200 (2480676) | 2480676..2481008 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW61_RS12205 (2481211) | 2481211..2481441 | - | 231 | WP_115197876.1 | hypothetical protein | - |
| QDW61_RS12210 (2481541) | 2481541..2481780 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW61_RS12215 (2481780) | 2481780..2482067 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW61_RS12220 (2482139) | 2482139..2482294 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW61_RS12225 (2482511) | 2482511..2482762 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDW61_RS12230 (2482829) | 2482829..2483107 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW61_RS12235 (2483109) | 2483109..2484158 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDW61_RS12240 (2484172) | 2484172..2484924 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDW61_RS12245 (2485202) | 2485202..2485291 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW61_RS12250 (2485346) | 2485346..2485558 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW61_RS12255 (2485859) | 2485859..2486074 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW61_RS12260 (2486438) | 2486438..2486608 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDW61_RS12265 (2486828) | 2486828..2487043 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW61_RS12270 (2487048) | 2487048..2487359 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDW61_RS12275 (2487356) | 2487356..2487889 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDW61_RS12280 (2487886) | 2487886..2488383 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW61_RS12285 (2488745) | 2488745..2488957 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW61_RS12290 (2488968) | 2488968..2489156 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW61_RS12295 (2489159) | 2489159..2489224 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDW61_RS12300 (2489229) | 2489229..2489459 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDW61_RS12305 (2489631) | 2489631..2489804 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW61_RS12310 (2489956) | 2489956..2490366 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDW61_RS12315 (2490424) | 2490424..2490657 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDW61_RS12320 (2491046) | 2491046..2491591 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDW61_RS12325 (2491566) | 2491566..2493047 | + | 1482 | Protein_2411 | phage terminase large subunit family protein | - |
| QDW61_RS12330 (2493049) | 2493049..2494866 | + | 1818 | Protein_2412 | tail fiber protein | - |
| QDW61_RS12335 (2494866) | 2494866..2495441 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDW61_RS12340 (2495539) | 2495539..2496129 | - | 591 | WP_120145705.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW61_RS12345 (2496446) | 2496446..2496679 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW61_RS12350 (2496748) | 2496748..2496861 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW61_RS12355 (2497465) | 2497465..2498748 | + | 1284 | Protein_2417 | MHS family MFS transporter YdfJ | - |
| QDW61_RS12360 (2498838) | 2498838..2500298 | + | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| QDW61_RS12365 (2500334) | 2500334..2500537 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDW61_RS12370 (2500714) | 2500714..2501400 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDW61_RS12375 (2501489) | 2501489..2502235 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| QDW61_RS12380 (2502372) | 2502372..2504417 | + | 2046 | WP_063085278.1 | peptidyl-dipeptidase Dcp | - |
| QDW61_RS12385 (2504462) | 2504462..2504542 | - | 81 | Protein_2423 | hypothetical protein | - |
| QDW61_RS12390 (2504782) | 2504782..2505174 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|