MGE detailed information
MGE type: Prophage MGE length: 39895 bp
Accession: NZ_CP122643 Location: 2202798..2242692 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Accession: NZ_CP122643 Location: 2202798..2242692 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW55_RS10830 () | 2199522..2199974 | + | 453 | WP_032141314.1 | dihydroneopterin triphosphate diphosphatase | - |
| QDW55_RS10835 () | 2200003..2200743 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QDW55_RS10840 () | 2200778..2201299 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QDW55_RS10845 () | 2201301..2201903 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| QDW55_RS10850 () | 2201974..2202039 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QDW55_RS10855 () | 2202178..2202789 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QDW55_RS10860 () | 2202798..2203808 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QDW55_RS10865 () | 2203956..2204741 | - | 786 | WP_000571471.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QDW55_RS10870 () | 2204738..2205493 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| QDW55_RS10875 () | 2205572..2206504 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QDW55_RS10880 () | 2206520..2207842 | + | 1323 | WP_052907711.1 | murein DD-endopeptidase MepM | - |
| QDW55_RS10885 () | 2207962..2208933 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QDW55_RS10890 () | 2209065..2210507 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QDW55_RS10895 () | 2210635..2211504 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| QDW55_RS10900 () | 2211842..2213317 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QDW55_RS10905 () | 2213552..2215363 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QDW55_RS10910 () | 2215400..2216041 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QDW55_RS10915 () | 2216096..2217274 | - | 1179 | WP_021517157.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QDW55_RS10920 () | 2217408..2217698 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QDW55_RS10925 () | 2217765..2218121 | + | 357 | WP_001295500.1 | protein YebF | - |
| QDW55_RS10930 () | 2218448..2219107 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| QDW55_RS10935 () | 2219271..2220440 | - | 1170 | WP_000942662.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW55_RS10940 () | 2220497..2220922 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW55_RS10945 () | 2221079..2223139 | + | 2061 | WP_063086345.1 | oligopeptidase B | - |
| QDW55_RS10950 () | 2223136..2223798 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QDW55_RS10955 () | 2223822..2224478 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QDW55_RS10960 () | 2224580..2224810 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QDW55_RS10965 () | 2224949..2225323 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| QDW55_RS10970 () | 2225327..2226199 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| QDW55_RS10975 () | 2226212..2226553 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2226581..2226852 | - | 272 | - | - | Antitoxin Detail |
| - | 2226711..2226814 | + | 104 | - | - | Toxin Detail |
| QDW55_RS10980 () | 2226949..2227605 | + | 657 | WP_001520704.1 | protein-serine/threonine phosphatase | - |
| QDW55_RS10985 () | 2227606..2227797 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QDW55_RS10990 () | 2227902..2228138 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QDW55_RS10995 () | 2228256..2229695 | - | 1440 | WP_024166480.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QDW55_RS11000 () | 2229775..2232408 | - | 2634 | WP_001306757.1 | Intermembrane transport protein YebT | VF |
| QDW55_RS11005 () | 2232377..2233660 | - | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| QDW55_RS11010 () | 2233790..2234287 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| QDW55_RS11015 () | 2234384..2235082 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QDW55_RS11020 () | 2235102..2237150 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| QDW55_RS11025 () | 2237342..2238223 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QDW55_RS11030 () | 2238269..2239642 | - | 1374 | WP_001354729.1 | MFS transporter | - |
| QDW55_RS11035 () | 2239819..2240610 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| QDW55_RS11040 () | 2240754..2240993 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QDW55_RS11045 () | 2241152..2241295 | + | 144 | WP_063086347.1 | PhoP/PhoQ regulator MgrB | - |
| QDW55_RS11050 () | 2241370..2241657 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QDW55_RS11055 () | 2242327..2242470 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QDW55_RS11060 () | 2242483..2242692 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QDW55_RS11065 () | 2242858..2243667 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QDW55_RS11070 () | 2243664..2244230 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| QDW55_RS11075 () | 2244659..2245117 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QDW55_RS11080 () | 2245172..2246023 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QDW55_RS11085 () | 2246036..2246836 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|