MGE detailed information
MGE type: Prophage MGE length: 27407 bp
Accession: NZ_CP122625 Location: 2297635..2325041 Organism: Escherichia coli strain ETEC4089 Replicon: chromosome
Accession: NZ_CP122625 Location: 2297635..2325041 Organism: Escherichia coli strain ETEC4089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW64_RS11340 (2293016) | 2293016..2293726 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDW64_RS11345 (2293729) | 2293729..2294289 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDW64_RS11350 (2294324) | 2294324..2294665 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDW64_RS11355 (2294800) | 2294800..2295126 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDW64_RS11360 (2295332) | 2295332..2296546 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW64_RS11365 (2296558) | 2296558..2297577 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QDW64_RS11370 (2297765) | 2297765..2299045 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDW64_RS11375 (2299080) | 2299080..2299331 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW64_RS11380 (2299404) | 2299404..2301113 | - | 1710 | Protein_2224 | 3'-5' exoribonuclease | - |
| QDW64_RS11385 (2301101) | 2301101..2301358 | + | 258 | Protein_2225 | hypothetical protein | - |
| QDW64_RS11390 (2301399) | 2301399..2301821 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QDW64_RS11395 (2301818) | 2301818..2302307 | + | 490 | Protein_2227 | class I SAM-dependent methyltransferase | - |
| QDW64_RS11400 (2302690) | 2302690..2304229 | - | 1540 | Protein_2228 | IS66 family transposase ISEc22 | Transposase |
| QDW64_RS11405 (2304278) | 2304278..2304508 | - | 231 | Protein_2229 | IS66 family insertion sequence element accessory protein TnpB | - |
| QDW64_RS11410 (2304514) | 2304514..2304636 | - | 123 | Protein_2230 | IS66 family transposase ISEc22 | Transposase |
| QDW64_RS11415 (2304879) | 2304879..2305300 | + | 422 | Protein_2231 | hypothetical protein | - |
| QDW64_RS11425 (2306733) | 2306733..2307755 | + | 1023 | Protein_2233 | ISNCY family transposase ISCARN112 | Transposase |
| QDW64_RS11430 (2307876) | 2307876..2308025 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW64_RS11435 (2308462) | 2308462..2308794 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW64_RS11440 (2308997) | 2308997..2309302 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDW64_RS11445 (2309327) | 2309327..2309566 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW64_RS11450 (2309566) | 2309566..2309853 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW64_RS11455 (2309925) | 2309925..2310080 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW64_RS11460 (2310297) | 2310297..2310548 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDW64_RS11465 (2310615) | 2310615..2310893 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW64_RS11470 (2310895) | 2310895..2311944 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| QDW64_RS11475 (2311958) | 2311958..2312710 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDW64_RS11480 (2312988) | 2312988..2313077 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW64_RS11485 (2313132) | 2313132..2313344 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW64_RS11490 (2313645) | 2313645..2313860 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW64_RS11495 (2314224) | 2314224..2314394 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDW64_RS11500 (2314614) | 2314614..2314829 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW64_RS11505 (2314834) | 2314834..2315145 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDW64_RS11510 (2315142) | 2315142..2315675 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDW64_RS11515 (2315672) | 2315672..2316169 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW64_RS11520 (2316532) | 2316532..2316744 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW64_RS11525 (2316755) | 2316755..2316943 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW64_RS11530 (2316946) | 2316946..2317011 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDW64_RS11535 (2317016) | 2317016..2317246 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDW64_RS11540 (2317418) | 2317418..2317591 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW64_RS11545 (2317743) | 2317743..2318153 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDW64_RS11550 (2318211) | 2318211..2318444 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDW64_RS11555 (2318833) | 2318833..2319378 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDW64_RS11560 (2319353) | 2319353..2321158 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| QDW64_RS11565 (2321158) | 2321158..2321733 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDW64_RS11570 (2321831) | 2321831..2322421 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW64_RS11575 (2322738) | 2322738..2322971 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW64_RS11580 (2323040) | 2323040..2323153 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW64_RS11585 (2323674) | 2323674..2325041 | + | 1368 | Protein_2265 | MHS family MFS transporter | - |
| QDW64_RS11590 (2325130) | 2325130..2326590 | + | 1461 | WP_282833993.1 | mannitol dehydrogenase family protein | - |
| QDW64_RS11595 (2326625) | 2326625..2326828 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDW64_RS11600 (2327005) | 2327005..2327691 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDW64_RS11605 (2327780) | 2327780..2328526 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|