MGE detailed information
MGE type: Prophage MGE length: 40500 bp
Accession: NZ_CP122604 Location: 2419012..2459511 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Accession: NZ_CP122604 Location: 2419012..2459511 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW51_RS11795 (2414912) | 2414912..2416132 | + | 1221 | WP_000225257.1 | DNA-binding transcriptional repressor Mlc | - |
| QDW51_RS11800 (2416257) | 2416257..2416952 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| QDW51_RS11805 (2416905) | 2416905..2418197 | - | 1293 | WP_071591524.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDW51_RS11810 (2418355) | 2418355..2418969 | - | 615 | WP_063085996.1 | Tat proofreading chaperone DmsD | - |
| QDW51_RS11815 (2419012) | 2419012..2419866 | - | 855 | WP_063085994.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDW51_RS11820 (2419868) | 2419868..2420485 | - | 618 | WP_063085992.1 | dimethylsulfoxide reductase subunit B | - |
| QDW51_RS11825 (2420496) | 2420496..2422919 | - | 2424 | WP_074150141.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW51_RS11830 (2422980) | 2422980..2425406 | - | 2427 | WP_219804703.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDW51_RS11835 (2425605) | 2425605..2425910 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDW51_RS11840 (2426018) | 2426018..2426728 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDW51_RS11845 (2426731) | 2426731..2427291 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDW51_RS11850 (2427326) | 2427326..2427667 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDW51_RS11855 (2427802) | 2427802..2428128 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDW51_RS11860 (2428334) | 2428334..2429548 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDW51_RS11865 (2429560) | 2429560..2430579 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDW51_RS11870 (2430767) | 2430767..2432047 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDW51_RS11875 (2432082) | 2432082..2432333 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW51_RS11880 (2432406) | 2432406..2434877 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDW51_RS11885 (2434970) | 2434970..2435161 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDW51_RS11890 (2435158) | 2435158..2435346 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW51_RS11895 (2435914) | 2435914..2436132 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDW51_RS11900 (2436162) | 2436162..2436290 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDW51_RS11905 (2436292) | 2436292..2436447 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDW51_RS11910 (2436614) | 2436614..2437021 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDW51_RS11915 (2437105) | 2437105..2437335 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDW51_RS11920 (2437319) | 2437319..2437504 | + | 186 | Protein_2331 | hypothetical protein | - |
| QDW51_RS11925 (2437502) | 2437502..2437642 | + | 141 | Protein_2332 | DUF977 family protein | - |
| QDW51_RS11930 (2437639) | 2437639..2438128 | + | 490 | Protein_2333 | class I SAM-dependent methyltransferase | - |
| QDW51_RS11935 (2438606) | 2438606..2439027 | + | 422 | Protein_2334 | hypothetical protein | - |
| QDW51_RS11940 (2439683) | 2439683..2440705 | + | 1023 | Protein_2335 | ISNCY family transposase ISCARN112 | Transposase |
| QDW51_RS11945 (2440826) | 2440826..2440975 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW51_RS11950 (2441437) | 2441437..2441769 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDW51_RS11955 (2441972) | 2441972..2442277 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDW51_RS11960 (2442302) | 2442302..2442541 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW51_RS11965 (2442541) | 2442541..2442828 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW51_RS11970 (2442900) | 2442900..2443055 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW51_RS11975 (2443272) | 2443272..2443523 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDW51_RS11980 (2443590) | 2443590..2443868 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW51_RS11985 (2443870) | 2443870..2444919 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDW51_RS11990 (2444933) | 2444933..2445685 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDW51_RS11995 (2445963) | 2445963..2446052 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW51_RS12000 (2446107) | 2446107..2446319 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW51_RS12005 (2446620) | 2446620..2446835 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW51_RS12010 (2447199) | 2447199..2447369 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDW51_RS12015 (2447589) | 2447589..2447804 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW51_RS12020 (2447809) | 2447809..2448120 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDW51_RS12025 (2448117) | 2448117..2448650 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDW51_RS12030 (2448647) | 2448647..2449144 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW51_RS12035 (2449508) | 2449508..2449720 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW51_RS12040 (2449731) | 2449731..2449919 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW51_RS12045 (2449922) | 2449922..2449987 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDW51_RS12050 (2449992) | 2449992..2450222 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDW51_RS12055 (2450394) | 2450394..2450567 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW51_RS12060 (2450719) | 2450719..2451129 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDW51_RS12065 (2451187) | 2451187..2451420 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDW51_RS12070 (2451809) | 2451809..2452354 | + | 546 | WP_000453567.1 | terminase small subunit | - |
| QDW51_RS12075 (2452329) | 2452329..2453810 | + | 1482 | Protein_2362 | phage terminase large subunit family protein | - |
| QDW51_RS12080 (2453812) | 2453812..2455629 | + | 1818 | Protein_2363 | tail fiber protein | - |
| QDW51_RS12085 (2455629) | 2455629..2456204 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDW51_RS12090 (2456302) | 2456302..2456892 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW51_RS12095 (2457209) | 2457209..2457442 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW51_RS12100 (2457511) | 2457511..2457624 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDW51_RS12105 (2458228) | 2458228..2459511 | + | 1284 | Protein_2368 | MHS family MFS transporter YdfJ | - |
| QDW51_RS12110 (2459601) | 2459601..2461061 | + | 1461 | WP_282832988.1 | mannitol dehydrogenase family protein | - |
| QDW51_RS12115 (2461097) | 2461097..2461300 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDW51_RS12120 (2461477) | 2461477..2462163 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDW51_RS12125 (2462252) | 2462252..2462998 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|