MGE detailed information
MGE type: Prophage MGE length: 38666 bp
Accession: NZ_CP122604 Location: 2115415..2154080 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Accession: NZ_CP122604 Location: 2115415..2154080 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW51_RS10240 () | 2110680..2111420 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QDW51_RS10245 () | 2111455..2111976 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QDW51_RS10250 () | 2111978..2112580 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| QDW51_RS10255 () | 2112651..2112716 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QDW51_RS10260 () | 2112855..2113466 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QDW51_RS10265 () | 2113475..2114485 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QDW51_RS10270 () | 2114633..2115418 | - | 786 | WP_000571471.1 | zinc ABC transporter permease subunit ZnuB | - |
| QDW51_RS10275 () | 2115415..2116170 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| QDW51_RS10280 () | 2116249..2117181 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QDW51_RS10285 () | 2117197..2118519 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QDW51_RS10290 () | 2118639..2119610 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QDW51_RS10295 () | 2119742..2121184 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QDW51_RS10300 () | 2121312..2122181 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| QDW51_RS10305 () | 2122519..2123994 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QDW51_RS10310 () | 2124248..2124706 | + | 459 | WP_025210499.1 | IS200-IS605 family transposase IS200C | Transposase |
| QDW51_RS10315 () | 2124940..2126751 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QDW51_RS10320 () | 2126788..2127429 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QDW51_RS10325 () | 2127484..2128662 | - | 1179 | WP_021517157.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QDW51_RS10330 () | 2128796..2129086 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QDW51_RS10335 () | 2129153..2129509 | + | 357 | WP_063086341.1 | protein YebF | - |
| QDW51_RS10340 () | 2129836..2130495 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| QDW51_RS10345 () | 2130659..2131828 | - | 1170 | WP_000942662.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW51_RS10350 () | 2131885..2132310 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW51_RS10355 () | 2132467..2134527 | + | 2061 | WP_063086345.1 | oligopeptidase B | - |
| QDW51_RS10360 () | 2134524..2135186 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QDW51_RS10365 () | 2135210..2135866 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QDW51_RS10370 () | 2135968..2136198 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QDW51_RS10375 () | 2136337..2136711 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| QDW51_RS10380 () | 2136715..2137587 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| QDW51_RS10385 () | 2137600..2137941 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2137969..2138240 | - | 272 | - | - | Antitoxin Detail |
| - | 2138099..2138202 | + | 104 | - | - | Toxin Detail |
| QDW51_RS10390 () | 2138337..2138993 | + | 657 | WP_001520704.1 | protein-serine/threonine phosphatase | - |
| QDW51_RS10395 () | 2138994..2139185 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QDW51_RS10400 () | 2139290..2139526 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QDW51_RS10405 () | 2139644..2141083 | - | 1440 | WP_024166480.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QDW51_RS10410 () | 2141163..2143796 | - | 2634 | WP_001306757.1 | Intermembrane transport protein YebT | VF |
| QDW51_RS10415 () | 2143765..2145048 | - | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| QDW51_RS10420 () | 2145178..2145675 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| QDW51_RS10425 () | 2145772..2146470 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QDW51_RS10430 () | 2146490..2148538 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| QDW51_RS10435 () | 2148730..2149611 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QDW51_RS10440 () | 2149657..2151030 | - | 1374 | WP_001354729.1 | MFS transporter | - |
| QDW51_RS10445 () | 2151207..2151998 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| QDW51_RS10450 () | 2152142..2152381 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QDW51_RS10455 () | 2152540..2152683 | + | 144 | WP_063086347.1 | PhoP/PhoQ regulator MgrB | - |
| QDW51_RS10460 () | 2152758..2153045 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QDW51_RS10465 () | 2153715..2153858 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QDW51_RS10470 () | 2153871..2154080 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QDW51_RS10475 () | 2154246..2155055 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QDW51_RS10480 () | 2155052..2155618 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| QDW51_RS10485 () | 2156047..2156505 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QDW51_RS10490 () | 2156560..2157411 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QDW51_RS10495 () | 2157424..2158224 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|