MGE detailed information
MGE type: Prophage MGE length: 33907 bp
Accession: NZ_CP122600 Location: 2425584..2459490 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Accession: NZ_CP122600 Location: 2425584..2459490 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX83_RS11830 (2422959) | 2422959..2425385 | - | 2427 | WP_219804703.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDX83_RS11835 (2425584) | 2425584..2425889 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDX83_RS11840 (2425997) | 2425997..2426707 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QDX83_RS11845 (2426710) | 2426710..2427270 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDX83_RS11850 (2427305) | 2427305..2427646 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QDX83_RS11855 (2427781) | 2427781..2428107 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QDX83_RS11860 (2428313) | 2428313..2429527 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDX83_RS11865 (2429539) | 2429539..2430558 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QDX83_RS11870 (2430746) | 2430746..2432026 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QDX83_RS11875 (2432061) | 2432061..2432312 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDX83_RS11880 (2432385) | 2432385..2434856 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QDX83_RS11885 (2434949) | 2434949..2435140 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QDX83_RS11890 (2435137) | 2435137..2435325 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDX83_RS11895 (2435893) | 2435893..2436111 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QDX83_RS11900 (2436141) | 2436141..2436269 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDX83_RS11905 (2436271) | 2436271..2436426 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDX83_RS11910 (2436593) | 2436593..2437000 | - | 408 | WP_063085987.1 | DNA-binding transcriptional dual regulator DicA | - |
| QDX83_RS11915 (2437084) | 2437084..2437314 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QDX83_RS11920 (2437298) | 2437298..2437483 | + | 186 | Protein_2331 | hypothetical protein | - |
| QDX83_RS11925 (2437481) | 2437481..2437621 | + | 141 | Protein_2332 | DUF977 family protein | - |
| QDX83_RS11930 (2437618) | 2437618..2438107 | + | 490 | Protein_2333 | class I SAM-dependent methyltransferase | - |
| QDX83_RS11935 (2438585) | 2438585..2439006 | + | 422 | Protein_2334 | hypothetical protein | - |
| QDX83_RS11940 (2439662) | 2439662..2440684 | + | 1023 | Protein_2335 | ISNCY family transposase ISCARN112 | Transposase |
| QDX83_RS11945 (2440805) | 2440805..2440954 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX83_RS11950 (2441416) | 2441416..2441748 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX83_RS11955 (2441951) | 2441951..2442256 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX83_RS11960 (2442281) | 2442281..2442520 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX83_RS11965 (2442520) | 2442520..2442807 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX83_RS11970 (2442879) | 2442879..2443034 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX83_RS11975 (2443251) | 2443251..2443502 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDX83_RS11980 (2443569) | 2443569..2443847 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDX83_RS11985 (2443849) | 2443849..2444898 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QDX83_RS11990 (2444912) | 2444912..2445664 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDX83_RS11995 (2445942) | 2445942..2446031 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDX83_RS12000 (2446086) | 2446086..2446298 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDX83_RS12005 (2446599) | 2446599..2446814 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDX83_RS12010 (2447178) | 2447178..2447348 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDX83_RS12015 (2447568) | 2447568..2447783 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDX83_RS12020 (2447788) | 2447788..2448099 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDX83_RS12025 (2448096) | 2448096..2448629 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDX83_RS12030 (2448626) | 2448626..2449123 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDX83_RS12035 (2449487) | 2449487..2449699 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDX83_RS12040 (2449710) | 2449710..2449898 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDX83_RS12045 (2449901) | 2449901..2449966 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDX83_RS12050 (2449971) | 2449971..2450201 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDX83_RS12055 (2450373) | 2450373..2450546 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDX83_RS12060 (2450698) | 2450698..2451108 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDX83_RS12065 (2451166) | 2451166..2451399 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDX83_RS12070 (2451788) | 2451788..2452333 | + | 546 | WP_000453567.1 | terminase small subunit | - |
| QDX83_RS12075 (2452308) | 2452308..2453789 | + | 1482 | Protein_2362 | phage terminase large subunit family protein | - |
| QDX83_RS12080 (2453791) | 2453791..2455608 | + | 1818 | Protein_2363 | tail fiber protein | - |
| QDX83_RS12085 (2455608) | 2455608..2456183 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDX83_RS12090 (2456281) | 2456281..2456871 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX83_RS12095 (2457188) | 2457188..2457421 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX83_RS12100 (2457490) | 2457490..2457603 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX83_RS12105 (2458207) | 2458207..2459490 | + | 1284 | Protein_2368 | MHS family MFS transporter YdfJ | - |
| QDX83_RS12110 (2459580) | 2459580..2461040 | + | 1461 | WP_282832988.1 | mannitol dehydrogenase family protein | - |
| QDX83_RS12115 (2461076) | 2461076..2461279 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QDX83_RS12120 (2461456) | 2461456..2462142 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX83_RS12125 (2462231) | 2462231..2462977 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|