MGE detailed information
MGE type: Prophage MGE length: 48666 bp
Accession: NZ_CP122588 Location: 2386939..2435604 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Accession: NZ_CP122588 Location: 2386939..2435604 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS11615 (2382320) | 2382320..2383030 | + | 711 | WP_072129879.1 | YnfC family lipoprotein | - |
| QDY30_RS11620 (2383033) | 2383033..2383593 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QDY30_RS11625 (2383628) | 2383628..2383969 | - | 342 | WP_119457889.1 | DUF1283 family protein | - |
| QDY30_RS11630 (2384104) | 2384104..2384430 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDY30_RS11635 (2384636) | 2384636..2385850 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDY30_RS11640 (2385862) | 2385862..2386881 | + | 1020 | WP_119457888.1 | Zn-dependent oxidoreductase | - |
| QDY30_RS11645 (2387069) | 2387069..2388349 | - | 1281 | WP_000876986.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QDY30_RS11650 (2388384) | 2388384..2388635 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDY30_RS11655 (2388708) | 2388708..2391179 | - | 2472 | WP_282866699.1 | 3'-5' exoribonuclease | - |
| QDY30_RS11660 (2391273) | 2391273..2391464 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| QDY30_RS11665 (2391461) | 2391461..2391649 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDY30_RS11670 (2392217) | 2392217..2392435 | - | 219 | WP_001171925.1 | protein YdfC | - |
| QDY30_RS11675 (2392465) | 2392465..2392593 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QDY30_RS11680 (2392595) | 2392595..2392750 | - | 156 | WP_000379578.1 | DUF1391 family protein | - |
| QDY30_RS11685 (2392919) | 2392919..2393326 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| QDY30_RS11690 (2393407) | 2393407..2393634 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| QDY30_RS11695 (2393618) | 2393618..2394139 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| QDY30_RS11700 (2394120) | 2394120..2395085 | + | 966 | WP_000054509.1 | hypothetical protein | - |
| QDY30_RS11705 (2395126) | 2395126..2395548 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QDY30_RS11710 (2395545) | 2395545..2396034 | + | 490 | Protein_2291 | class I SAM-dependent methyltransferase | - |
| QDY30_RS11715 (2396512) | 2396512..2396933 | + | 422 | Protein_2292 | hypothetical protein | - |
| QDY30_RS11720 (2397568) | 2397568..2397939 | + | 372 | WP_001406656.1 | ISNCY family transposase ISRel10 | Transposase |
| QDY30_RS11725 (2397977) | 2397977..2398639 | + | 663 | Protein_2294 | ISNCY family transposase ISCARN112 | Transposase |
| QDY30_RS11730 (2398760) | 2398760..2398909 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDY30_RS11735 (2399346) | 2399346..2399678 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| QDY30_RS11740 (2399881) | 2399881..2400186 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDY30_RS11745 (2400211) | 2400211..2400450 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDY30_RS11750 (2400450) | 2400450..2400737 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDY30_RS11755 (2400809) | 2400809..2400964 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY30_RS11760 (2401181) | 2401181..2401432 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDY30_RS11765 (2401499) | 2401499..2401777 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDY30_RS11770 (2401779) | 2401779..2402828 | + | 1050 | WP_061350716.1 | DUF968 domain-containing protein | - |
| QDY30_RS11775 (2402842) | 2402842..2403594 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDY30_RS11780 (2403872) | 2403872..2403961 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDY30_RS11785 (2404016) | 2404016..2404228 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDY30_RS11790 (2404529) | 2404529..2404744 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDY30_RS11795 (2405108) | 2405108..2405278 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDY30_RS11800 (2405498) | 2405498..2405713 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDY30_RS11805 (2405718) | 2405718..2406029 | + | 312 | WP_000189918.1 | DUF1327 domain-containing protein | - |
| QDY30_RS11810 (2406026) | 2406026..2406559 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDY30_RS11815 (2406556) | 2406556..2407053 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| QDY30_RS11820 (2407417) | 2407417..2407629 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDY30_RS11825 (2407640) | 2407640..2407828 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| QDY30_RS11830 (2407831) | 2407831..2407869 | + | 39 | Protein_2315 | hypothetical protein | - |
| QDY30_RS11835 (2407901) | 2407901..2408131 | + | 231 | WP_000720960.1 | protein YnfN | - |
| QDY30_RS11840 (2408304) | 2408304..2408477 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| QDY30_RS11845 (2408773) | 2408773..2408979 | + | 207 | WP_000548593.1 | hypothetical protein | - |
| QDY30_RS11850 (2409542) | 2409542..2410069 | + | 528 | WP_001595800.1 | DUF1441 family protein | - |
| QDY30_RS11855 (2410078) | 2410078..2412177 | + | 2100 | WP_023277784.1 | phage terminase large subunit family protein | - |
| QDY30_RS11860 (2412174) | 2412174..2412386 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| QDY30_RS11865 (2412386) | 2412386..2413894 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| QDY30_RS11870 (2413839) | 2413839..2415866 | + | 2028 | WP_023277783.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDY30_RS11875 (2415953) | 2415953..2416276 | + | 324 | WP_023140705.1 | DUF2190 family protein | - |
| QDY30_RS11880 (2416269) | 2416269..2416544 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDY30_RS11885 (2416556) | 2416556..2417134 | + | 579 | WP_023140704.1 | phage tail protein | - |
| QDY30_RS11890 (2417131) | 2417131..2417532 | + | 402 | WP_001079419.1 | phage minor tail U family protein | - |
| QDY30_RS11895 (2417543) | 2417543..2418286 | + | 744 | WP_021560209.1 | phage tail protein | - |
| QDY30_RS11900 (2418347) | 2418347..2418733 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| QDY30_RS11905 (2418742) | 2418742..2419071 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDY30_RS11910 (2419043) | 2419043..2422108 | + | 3066 | WP_023140703.1 | phage tail tape measure protein | - |
| QDY30_RS11915 (2422108) | 2422108..2422437 | + | 330 | WP_000447248.1 | phage tail protein | - |
| QDY30_RS11920 (2422447) | 2422447..2423145 | + | 699 | WP_061348596.1 | phage minor tail protein L | - |
| QDY30_RS11925 (2423151) | 2423151..2423894 | + | 744 | WP_000140751.1 | C40 family peptidase | - |
| QDY30_RS11930 (2423792) | 2423792..2424439 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| QDY30_RS11935 (2424499) | 2424499..2427912 | + | 3414 | WP_175087094.1 | phage tail protein | - |
| QDY30_RS11940 (2427983) | 2427983..2428582 | + | 600 | WP_061348595.1 | hypothetical protein | VF |
| QDY30_RS11945 (2428647) | 2428647..2431721 | + | 3075 | WP_072305171.1 | phage tail protein | - |
| QDY30_RS11950 (2431721) | 2431721..2432296 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| QDY30_RS11955 (2432394) | 2432394..2432984 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDY30_RS11960 (2433302) | 2433302..2433535 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDY30_RS11965 (2433604) | 2433604..2433717 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDY30_RS11970 (2434321) | 2434321..2435604 | + | 1284 | Protein_2343 | MHS family MFS transporter YdfJ | - |
| QDY30_RS11975 (2435694) | 2435694..2437154 | + | 1461 | WP_119457880.1 | mannitol dehydrogenase family protein | - |
| QDY30_RS11980 (2437190) | 2437190..2437393 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDY30_RS11985 (2437570) | 2437570..2438256 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDY30_RS11990 (2438345) | 2438345..2439091 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|