MGE detailed information
MGE type: Conjugative plasmid MGE length: 93344 bp
Accession: NZ_CP122453 Location: 1..93344 Organism: Escherichia coli strain 82.0312 Replicon: plasmid p2
Accession: NZ_CP122453 Location: 1..93344 Organism: Escherichia coli strain 82.0312 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBY78_RS25945 (1) | 1..858 | + | 858 | WP_050947965.1 | incFII family plasmid replication initiator RepA | - |
| QBY78_RS25950 (1868) | 1868..2131 | + | 264 | WP_016241862.1 | hypothetical protein | - |
| QBY78_RS25955 (2121) | 2121..2420 | + | 300 | WP_016241863.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QBY78_RS25960 (2561) | 2561..3538 | + | 978 | WP_050947967.1 | DUF4238 domain-containing protein | - |
| QBY78_RS25965 (3906) | 3906..4190 | + | 285 | WP_044864180.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QBY78_RS25970 (4190) | 4190..4465 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QBY78_RS25975 (4563) | 4563..4766 | + | 204 | Protein_6 | hypothetical protein | - |
| QBY78_RS25980 (5026) | 5026..8157 | + | 3132 | WP_050947969.1 | hypothetical protein | - |
| QBY78_RS25985 (8502) | 8502..9338 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QBY78_RS25990 (9338) | 9338..10141 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QBY78_RS25995 (10427) | 10427..11635 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| QBY78_RS26000 (11651) | 11651..11770 | - | 120 | Protein_11 | LysR family transcriptional regulator | - |
| QBY78_RS26005 (12001) | 12001..13206 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| QBY78_RS26010 (13650) | 13650..13970 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| QBY78_RS26015 (13963) | 13963..14349 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| QBY78_RS26020 (14357) | 14357..15043 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| QBY78_RS26025 (15021) | 15021..15644 | - | 624 | WP_000088607.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QBY78_RS26030 (15726) | 15726..16931 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QBY78_RS26035 (17044) | 17044..17637 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QBY78_RS26040 (17725) | 17725..18141 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| QBY78_RS26045 (18151) | 18151..19104 | - | 954 | Protein_20 | IS4 family transposase IS10R | Transposase |
| QBY78_RS26050 (19139) | 19139..22144 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QBY78_RS26055 (22308) | 22308..22865 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QBY78_RS26060 (23048) | 23048..23908 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QBY78_RS26065 (24057) | 24057..24314 | - | 258 | Protein_24 | IS4 family transposase IS10R | Transposase |
| QBY78_RS26070 (24384) | 24384..25315 | - | 932 | Protein_25 | IS3 family transposase IS1133 | Transposase |
| QBY78_RS26075 (25348) | 25348..26316 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| QBY78_RS26080 (26478) | 26478..27293 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QBY78_RS26085 (27429) | 27429..28397 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| QBY78_RS26090 (28454) | 28454..28660 | - | 207 | Protein_29 | IS3 family transposase IS1133 | Transposase |
| QBY78_RS26095 (28691) | 28691..29314 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| QBY78_RS26100 (29440) | 29440..32325 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QBY78_RS26105 (32650) | 32650..33063 | + | 414 | WP_042110548.1 | hypothetical protein | - |
| QBY78_RS26110 (33065) | 33065..33847 | + | 783 | WP_023352052.1 | site-specific integrase | - |
| QBY78_RS26115 (34019) | 34019..34372 | + | 354 | WP_000864814.1 | colicin M immunity protein | - |
| QBY78_RS26120 (34422) | 34422..35237 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| QBY78_RS26125 (35481) | 35481..36008 | + | 528 | WP_021561684.1 | colicin B immunity protein | - |
| QBY78_RS26130 (36026) | 36026..37561 | - | 1536 | WP_001282377.1 | pore-forming bacteriocin colicin B | - |
| QBY78_RS26135 (38003) | 38003..38515 | + | 513 | WP_021561682.1 | hypothetical protein | - |
| QBY78_RS26140 (38667) | 38667..39017 | - | 351 | WP_024185881.1 | plasmid partitioning/stability family protein | - |
| QBY78_RS26145 (39020) | 39020..39982 | - | 963 | WP_000959879.1 | plasmid segregation protein ParM | - |
| QBY78_RS26150 (40186) | 40186..40497 | + | 312 | WP_064770523.1 | hypothetical protein | - |
| QBY78_RS26155 (40574) | 40574..41257 | + | 684 | WP_000085940.1 | DNA methylase | - |
| QBY78_RS26160 (41258) | 41258..41479 | + | 222 | WP_001104866.1 | hypothetical protein | - |
| QBY78_RS26165 (41373) | 41373..41928 | + | 556 | Protein_44 | DUF1380 family protein | - |
| QBY78_RS26170 (41973) | 41973..42743 | + | 771 | WP_050947971.1 | hypothetical protein | - |
| QBY78_RS26175 (43157) | 43157..43582 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QBY78_RS26180 (43629) | 43629..44051 | + | 423 | WP_050947973.1 | DUF1380 family protein | - |
| QBY78_RS26185 (44048) | 44048..44239 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| QBY78_RS26190 (44511) | 44511..44759 | - | 249 | WP_071535686.1 | hypothetical protein | - |
| QBY78_RS26195 (45277) | 45277..45507 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QBY78_RS26200 (45559) | 45559..46920 | + | 1362 | WP_047414123.1 | DUF3560 domain-containing protein | - |
| QBY78_RS26205 (46967) | 46967..47530 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| QBY78_RS26210 (47682) | 47682..47951 | + | 270 | WP_071977877.1 | hypothetical protein | - |
| QBY78_RS26215 (48192) | 48192..48398 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| QBY78_RS26220 (48424) | 48424..48963 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| QBY78_RS26225 (49025) | 49025..49258 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| QBY78_RS26230 (49323) | 49323..51281 | + | 1959 | WP_000117212.1 | ParB/RepB/Spo0J family partition protein | - |
| QBY78_RS26235 (51336) | 51336..51770 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| QBY78_RS26240 (51767) | 51767..52529 | + | 763 | Protein_59 | plasmid SOS inhibition protein A | - |
| QBY78_RS26245 (52498) | 52498..52686 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (52655) | 52655..52720 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| - (52498) | 52498..52722 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52498) | 52498..52722 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52498) | 52498..52722 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52498) | 52498..52722 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52498) | 52498..52722 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| QBY78_RS26250 (52708) | 52708..52857 | + | 150 | Protein_61 | plasmid maintenance protein Mok | - |
| QBY78_RS26255 (52799) | 52799..52924 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QBY78_RS26260 (53144) | 53144..53374 | + | 231 | WP_074158030.1 | hypothetical protein | - |
| QBY78_RS26265 (53372) | 53372..53545 | - | 174 | Protein_64 | hypothetical protein | - |
| QBY78_RS26270 (53846) | 53846..54133 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| QBY78_RS26275 (54252) | 54252..55073 | + | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| QBY78_RS26280 (55369) | 55369..55878 | - | 510 | WP_000759163.1 | hypothetical protein | VF |
| QBY78_RS26285 (56293) | 56293..56676 | + | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QBY78_RS26290 (56867) | 56867..57553 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| QBY78_RS26295 (57647) | 57647..57874 | + | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| QBY78_RS26300 (57908) | 57908..58267 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| QBY78_RS26305 (58282) | 58282..58593 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QBY78_RS26310 (58615) | 58615..59181 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QBY78_RS26315 (59168) | 59168..59896 | + | 729 | WP_001230796.1 | type-F conjugative transfer system secretin TraK | - |
| QBY78_RS26320 (59896) | 59896..61323 | + | 1428 | WP_000146658.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QBY78_RS26325 (61313) | 61313..61903 | + | 591 | WP_000002789.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QBY78_RS26330 (61890) | 61890..62210 | + | 321 | WP_001057279.1 | conjugal transfer protein TrbD | - |
| QBY78_RS26335 (62203) | 62203..62454 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QBY78_RS26340 (62451) | 62451..62966 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QBY78_RS26345 (63101) | 63101..63322 | + | 222 | WP_001278696.1 | conjugal transfer protein TraR | - |
| QBY78_RS26350 (63315) | 63315..63728 | + | 414 | WP_000549581.1 | hypothetical protein | - |
| QBY78_RS26355 (63721) | 63721..64194 | + | 474 | WP_000549572.1 | hypothetical protein | - |
| QBY78_RS26360 (64273) | 64273..64489 | + | 217 | Protein_83 | hypothetical protein | - |
| QBY78_RS26365 (64490) | 64490..64801 | + | 312 | WP_000141580.1 | hypothetical protein | - |
| QBY78_RS26370 (64871) | 64871..65233 | + | 363 | WP_000835374.1 | hypothetical protein | - |
| QBY78_RS26375 (65359) | 65359..67989 | + | 2631 | WP_000069740.1 | type IV secretion system protein TraC | - |
| QBY78_RS26380 (67986) | 67986..68372 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| QBY78_RS26385 (68369) | 68369..69001 | + | 633 | WP_001203714.1 | type-F conjugative transfer system protein TraW | - |
| QBY78_RS26390 (68998) | 68998..69990 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QBY78_RS26395 (70016) | 70016..70477 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| QBY78_RS26400 (70507) | 70507..70959 | + | 453 | WP_000069428.1 | hypothetical protein | - |
| QBY78_RS26405 (70987) | 70987..71625 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QBY78_RS26410 (71622) | 71622..73430 | + | 1809 | WP_000821816.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QBY78_RS26415 (73457) | 73457..73714 | + | 258 | WP_000864328.1 | conjugal transfer protein TrbE | - |
| QBY78_RS26420 (73707) | 73707..74450 | + | 744 | WP_001030391.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QBY78_RS26425 (74466) | 74466..74813 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QBY78_RS26430 (74932) | 74932..75216 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QBY78_RS26435 (75203) | 75203..75748 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QBY78_RS26440 (75678) | 75678..76040 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| QBY78_RS26445 (76040) | 76040..77413 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QBY78_RS26450 (77410) | 77410..80235 | + | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QBY78_RS26455 (80232) | 80232..80741 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QBY78_RS26460 (80755) | 80755..81486 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QBY78_RS26465 (81739) | 81739..83964 | + | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| QBY78_RS26470 (83964) | 83964..89234 | + | 5271 | WP_283154911.1 | Multifunctional conjugation protein TraI | Relaxase |
| QBY78_RS26475 (89254) | 89254..90000 | + | 747 | WP_050947963.1 | conjugal transfer pilus acetylase TraX | - |
| QBY78_RS26480 (90055) | 90055..90615 | + | 561 | WP_033803061.1 | fertility inhibition protein FinO | - |
| QBY78_RS26485 (90751) | 90751..90963 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| QBY78_RS26490 (91209) | 91209..91670 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| QBY78_RS26495 (91716) | 91716..91925 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| QBY78_RS26500 (91964) | 91964..92554 | + | 591 | WP_024228807.1 | DUF2726 domain-containing protein | - |
| QBY78_RS26505 (92794) | 92794..93054 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|