MGE detailed information
MGE type: Conjugative plasmid MGE length: 114231 bp
Accession: NZ_CP122452 Location: 1..114231 Organism: Escherichia coli strain 82.0312 Replicon: plasmid p1
Accession: NZ_CP122452 Location: 1..114231 Organism: Escherichia coli strain 82.0312 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBY78_RS25275 (1) | 1..858 | + | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| QBY78_RS25280 (1914) | 1914..2618 | + | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| QBY78_RS25285 (2705) | 2705..2875 | + | 171 | Protein_2 | DsbA family protein | - |
| QBY78_RS25290 (2865) | 2865..3371 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| QBY78_RS25295 (3608) | 3608..4369 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QBY78_RS25300 (4716) | 4716..6602 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
| QBY78_RS25305 (6643) | 6643..7170 | + | 528 | WP_000178050.1 | iron transporter | - |
| QBY78_RS25310 (7274) | 7274..8653 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QBY78_RS25315 (8656) | 8656..9939 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QBY78_RS25320 (9929) | 9929..11059 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QBY78_RS25325 (11064) | 11064..11759 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QBY78_RS25330 (11746) | 11746..12231 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QBY78_RS25335 (12256) | 12256..12741 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| QBY78_RS25340 (12863) | 12863..13496 | + | 634 | Protein_13 | histidine-type phosphatase | - |
| QBY78_RS25345 (13646) | 13646..13819 | - | 174 | Protein_14 | IS5 family transposase ISKpn26 | Transposase |
| QBY78_RS25350 (13820) | 13820..14134 | - | 315 | Protein_15 | IS5 family transposase ISKpn26 | Transposase |
| QBY78_RS25355 (14807) | 14807..15157 | - | 351 | Protein_16 | IS3 family transposase | - |
| QBY78_RS25360 (15243) | 15243..16742 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| QBY78_RS25365 (16739) | 16739..17494 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| QBY78_RS25370 (17559) | 17559..17962 | - | 404 | Protein_19 | IS3 family transposase IS629 | Transposase |
| QBY78_RS25375 (17988) | 17988..18293 | + | 306 | Protein_20 | IS91 family transposase ISSbo1 | Transposase |
| QBY78_RS25380 (18816) | 18816..19991 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QBY78_RS25385 (20060) | 20060..22321 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QBY78_RS25390 (22490) | 22490..23266 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QBY78_RS25395 (23274) | 23274..24149 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QBY78_RS25400 (24481) | 24481..25167 | - | 687 | Protein_25 | replication initiation protein | - |
| QBY78_RS25405 (26619) | 26619..26954 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QBY78_RS25410 (27083) | 27083..27430 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QBY78_RS25415 (27450) | 27450..27959 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QBY78_RS25420 (27956) | 27956..28216 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QBY78_RS25425 (28318) | 28318..29057 | + | 740 | Protein_30 | IS3 family transposase IS629 | Transposase |
| QBY78_RS25430 (29730) | 29730..31238 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QBY78_RS25435 (31322) | 31322..31660 | + | 339 | Protein_32 | IS3 family transposase IS629 | Transposase |
| QBY78_RS25440 (31740) | 31740..32144 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QBY78_RS25445 (32141) | 32141..32488 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QBY78_RS25450 (32537) | 32537..33482 | + | 946 | Protein_35 | IS66 family transposase ISEc8 | Transposase |
| QBY78_RS25455 (33568) | 33568..34590 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| QBY78_RS25460 (34587) | 34587..35369 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QBY78_RS25465 (35437) | 35437..36045 | + | 609 | Protein_38 | IS66 family transposase ISEc22 | Transposase |
| QBY78_RS25470 (36108) | 36108..36899 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QBY78_RS25475 (36906) | 36906..38876 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QBY78_RS25480 (39158) | 39158..39582 | + | 425 | Protein_41 | IS3 family transposase IS2 | Transposase |
| QBY78_RS25485 (40119) | 40119..40391 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QBY78_RS25490 (40837) | 40837..41012 | + | 176 | Protein_43 | IS3 family transposase | - |
| QBY78_RS25495 (41238) | 41238..42407 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| QBY78_RS25500 (42774) | 42774..42962 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| QBY78_RS25505 (43083) | 43083..43823 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| QBY78_RS25510 (44066) | 44066..45043 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| QBY78_RS25515 (46218) | 46218..46859 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| QBY78_RS25520 (49181) | 49181..49399 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QBY78_RS25525 (49401) | 49401..49706 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QBY78_RS25530 (49707) | 49707..50516 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| QBY78_RS25535 (50654) | 50654..50929 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| QBY78_RS25540 (50923) | 50923..51567 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| QBY78_RS25545 (51796) | 51796..52767 | + | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| QBY78_RS25550 (52772) | 52772..53164 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| QBY78_RS25555 (53169) | 53169..54439 | - | 1271 | Protein_56 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QBY78_RS25560 (54439) | 54439..54876 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QBY78_RS25565 (54873) | 54873..55121 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| QBY78_RS25570 (55256) | 55256..55774 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| QBY78_RS25575 (55793) | 55793..57013 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| QBY78_RS25580 (57432) | 57432..58262 | + | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| QBY78_RS25585 (58256) | 58256..59053 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| QBY78_RS25590 (59053) | 59053..60225 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| QBY78_RS25595 (60329) | 60329..60469 | + | 141 | Protein_64 | hypothetical protein | - |
| QBY78_RS25600 (60466) | 60466..60777 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| QBY78_RS25605 (60853) | 60853..61536 | + | 684 | WP_000086169.1 | DNA methylase | - |
| QBY78_RS25610 (61537) | 61537..61758 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QBY78_RS25615 (61688) | 61688..62206 | + | 519 | WP_223364201.1 | DUF1380 family protein | - |
| QBY78_RS25620 (62251) | 62251..63021 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| QBY78_RS25625 (63437) | 63437..63862 | + | 426 | WP_001198903.1 | antirestriction protein | - |
| QBY78_RS25630 (63909) | 63909..64331 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| QBY78_RS25635 (64328) | 64328..64519 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QBY78_RS25640 (65482) | 65482..65712 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| QBY78_RS25645 (65764) | 65764..67125 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| QBY78_RS25650 (67172) | 67172..67735 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| QBY78_RS25655 (67821) | 67821..68279 | - | 459 | WP_011478091.1 | hypothetical protein | - |
| QBY78_RS25660 (68581) | 68581..69108 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| QBY78_RS25665 (69165) | 69165..69398 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| QBY78_RS25670 (69457) | 69457..71415 | + | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| QBY78_RS25675 (71470) | 71470..71904 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| QBY78_RS25680 (71901) | 71901..72664 | + | 764 | Protein_81 | plasmid SOS inhibition protein A | - |
| - (72632) | 72632..72831 | + | 200 | NuclAT_0 | - | - |
| - (72632) | 72632..72831 | + | 200 | NuclAT_0 | - | - |
| - (72632) | 72632..72831 | + | 200 | NuclAT_0 | - | - |
| - (72632) | 72632..72831 | + | 200 | NuclAT_0 | - | - |
| QBY78_RS25685 (72838) | 72838..72987 | + | 150 | Protein_82 | DUF5431 family protein | - |
| QBY78_RS25690 (72929) | 72929..73054 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| QBY78_RS25695 (73372) | 73372..73669 | - | 298 | Protein_84 | hypothetical protein | - |
| QBY78_RS25700 (73970) | 73970..74257 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| QBY78_RS25705 (74376) | 74376..75197 | + | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| QBY78_RS25710 (75493) | 75493..76095 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| QBY78_RS25715 (76426) | 76426..76809 | + | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QBY78_RS25720 (77003) | 77003..77689 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| QBY78_RS25725 (77783) | 77783..78010 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QBY78_RS25730 (78044) | 78044..78403 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| QBY78_RS25735 (78418) | 78418..78729 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| QBY78_RS25740 (78751) | 78751..79317 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| QBY78_RS25745 (79304) | 79304..80032 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QBY78_RS25750 (80032) | 80032..81459 | + | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QBY78_RS25755 (81449) | 81449..82039 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QBY78_RS25760 (82026) | 82026..82346 | + | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| QBY78_RS25765 (82339) | 82339..82591 | + | 253 | Protein_98 | conjugal transfer protein TrbG | - |
| QBY78_RS25770 (82588) | 82588..83103 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QBY78_RS25775 (83238) | 83238..83459 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| QBY78_RS25780 (83452) | 83452..83925 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| QBY78_RS25785 (84005) | 84005..84224 | + | 220 | Protein_102 | hypothetical protein | - |
| QBY78_RS25790 (84591) | 84591..87221 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| QBY78_RS25795 (87218) | 87218..87604 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| QBY78_RS25800 (87601) | 87601..88233 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| QBY78_RS25805 (88230) | 88230..89222 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QBY78_RS25810 (89252) | 89252..89557 | + | 306 | WP_283154909.1 | hypothetical protein | - |
| QBY78_RS25815 (89566) | 89566..90204 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QBY78_RS25820 (90201) | 90201..92051 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QBY78_RS25825 (92078) | 92078..92335 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| QBY78_RS25830 (92328) | 92328..93071 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QBY78_RS25835 (93085) | 93085..93426 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| QBY78_RS25840 (93407) | 93407..93742 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| QBY78_RS25845 (93823) | 93823..94107 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QBY78_RS25850 (94094) | 94094..94639 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QBY78_RS25855 (94569) | 94569..94916 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| QBY78_RS25860 (94897) | 94897..95289 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| QBY78_RS25865 (95276) | 95276..96649 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| QBY78_RS25870 (96646) | 96646..99468 | + | 2823 | WP_113452868.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QBY78_RS25875 (99484) | 99484..99969 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| QBY78_RS25880 (100018) | 100018..100749 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| QBY78_RS25885 (100952) | 100952..101689 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| QBY78_RS25890 (101740) | 101740..103884 | + | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| QBY78_RS25895 (103884) | 103884..109154 | + | 5271 | WP_283154910.1 | Multifunctional conjugation protein TraI | Relaxase |
| QBY78_RS25900 (109174) | 109174..109920 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| QBY78_RS25905 (109979) | 109979..110839 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| QBY78_RS25910 (110942) | 110942..111502 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| QBY78_RS25915 (111631) | 111631..111843 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| QBY78_RS25920 (112088) | 112088..112549 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| QBY78_RS25925 (112595) | 112595..112804 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| QBY78_RS25930 (112842) | 112842..113432 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| QBY78_RS25935 (113672) | 113672..113932 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| QBY78_RS25940 (114036) | 114036..114219 | + | 184 | Protein_133 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|