MGE detailed information
MGE type: Genomic_island MGE length: 25292 bp
Accession: NZ_CP122451 Location: 4408020..4433311 Organism: Escherichia coli strain 82.0312 Replicon: chromosome
Accession: NZ_CP122451 Location: 4408020..4433311 Organism: Escherichia coli strain 82.0312 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBY78_RS21530 (4404551) | 4404551..4405276 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| QBY78_RS21535 (4405313) | 4405313..4405852 | - | 540 | WP_000824099.1 | fimbrial protein | - |
| QBY78_RS21540 (4405917) | 4405917..4406465 | - | 549 | WP_000695555.1 | type 1 fimbrial major subunit FimA | - |
| QBY78_RS21545 (4406946) | 4406946..4407542 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| QBY78_RS21550 (4408020) | 4408020..4408622 | - | 603 | WP_000790574.1 | ISKra4 family transposase ISCep1 | VF |
| QBY78_RS21555 (4410087) | 4410087..4410803 | + | 717 | WP_071535310.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QBY78_RS21560 (4410823) | 4410823..4411929 | + | 1107 | WP_001683519.1 | N-acetylneuraminate epimerase | - |
| QBY78_RS21565 (4411994) | 4411994..4412974 | + | 981 | WP_087598321.1 | sialate O-acetylesterase | - |
| QBY78_RS21570 (4412982) | 4412982..4413086 | - | 105 | Protein_4231 | HNH endonuclease | - |
| QBY78_RS21575 (4413186) | 4413186..4414058 | + | 873 | WP_000168586.1 | HNH endonuclease | - |
| QBY78_RS21580 (4414103) | 4414103..4414282 | + | 180 | Protein_4233 | peptidase | - |
| QBY78_RS21585 (4414681) | 4414681..4416705 | - | 2025 | WP_244578867.1 | hypothetical protein | - |
| QBY78_RS21590 (4417674) | 4417674..4417823 | - | 150 | Protein_4235 | hypothetical protein | - |
| QBY78_RS21595 (4417908) | 4417908..4418105 | - | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| QBY78_RS21600 (4418117) | 4418117..4418605 | - | 489 | WP_000761683.1 | DUF5983 family protein | - |
| QBY78_RS21605 (4418602) | 4418602..4418979 | - | 378 | WP_001094426.1 | TA system toxin CbtA family protein | Toxin Detail |
| QBY78_RS21610 (4419069) | 4419069..4419437 | - | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QBY78_RS21615 (4419517) | 4419517..4419738 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| QBY78_RS21620 (4419825) | 4419825..4420301 | - | 477 | WP_001298074.1 | RadC family protein | - |
| QBY78_RS21625 (4420316) | 4420316..4420801 | - | 486 | WP_000213697.1 | antirestriction protein | - |
| QBY78_RS21630 (4420892) | 4420892..4421710 | - | 819 | WP_001175160.1 | DUF932 domain-containing protein | - |
| QBY78_RS21635 (4421800) | 4421800..4422033 | - | 234 | WP_001278290.1 | DUF905 family protein | - |
| QBY78_RS21640 (4422039) | 4422039..4422716 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| QBY78_RS21645 (4422864) | 4422864..4423544 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QBY78_RS21650 (4423747) | 4423747..4424631 | - | 885 | Protein_4247 | YfjP family GTPase | - |
| QBY78_RS21655 (4424732) | 4424732..4425955 | + | 1224 | WP_001107221.1 | hypothetical protein | - |
| QBY78_RS21660 (4427438) | 4427438..4428169 | + | 732 | WP_097738028.1 | inovirus Gp2 family protein | - |
| QBY78_RS21665 (4428497) | 4428497..4429375 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| QBY78_RS21670 (4429431) | 4429431..4430065 | - | 635 | Protein_4251 | IS3 family transposase IS2 | Transposase |
| QBY78_RS21675 (4430363) | 4430363..4430479 | + | 117 | Protein_4252 | phosphoporin PhoE | - |
| QBY78_RS21680 (4430481) | 4430481..4430614 | + | 134 | Protein_4253 | phosphate-starvation-inducible protein PsiE | - |
| QBY78_RS21685 (4430689) | 4430689..4432140 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QBY78_RS21690 (4432133) | 4432133..4433311 | - | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QBY78_RS21695 (4433544) | 4433544..4433678 | + | 135 | Protein_4256 | hypothetical protein | - |
| QBY78_RS21700 (4433785) | 4433785..4434998 | + | 1214 | WP_164504460.1 | IS3 family transposase | - |
| QBY78_RS21705 (4435289) | 4435289..4435867 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QBY78_RS21710 (4435890) | 4435890..4436708 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QBY78_RS21715 (4436708) | 4436708..4437226 | + | 519 | WP_001217008.1 | FidL-like protein | - |
| QBY78_RS21720 (4437746) | 4437746..4438024 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|