MGE detailed information
MGE type: Prophage MGE length: 46781 bp
Accession: NZ_CP122301 Location: 2652253..2699033 Organism: Salmonella enterica strain 27A Replicon: chromosome
Accession: NZ_CP122301 Location: 2652253..2699033 Organism: Salmonella enterica strain 27A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8R57_RS12955 () | 2647766..2648263 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| P8R57_RS12960 () | 2648392..2649675 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| P8R57_RS12965 () | 2649644..2652277 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| P8R57_RS12970 () | 2652355..2653794 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P8R57_RS12975 () | 2653912..2654148 | + | 237 | WP_024131108.1 | YebV family protein | - |
| P8R57_RS12980 () | 2654259..2654450 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| P8R57_RS12985 () | 2654469..2655119 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| P8R57_RS12990 () | 2655343..2655507 | - | 165 | WP_001134856.1 | membrane protein | - |
| P8R57_RS12995 () | 2655792..2656514 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P8R57_RS13000 () | 2657198..2657593 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| P8R57_RS13005 () | 2657923..2658399 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| P8R57_RS13010 () | 2658772..2659191 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| P8R57_RS13015 () | 2659564..2659833 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| P8R57_RS13020 () | 2659999..2660139 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| P8R57_RS13025 () | 2660285..2661492 | - | 1208 | Protein_2548 | IS256 family transposase ISEc39 | Transposase |
| P8R57_RS13030 () | 2661562..2662028 | + | 467 | Protein_2549 | tyrosine-type recombinase/integrase | - |
| P8R57_RS13035 () | 2663278..2664192 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| P8R57_RS13040 () | 2664325..2664483 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P8R57_RS13045 () | 2664493..2665107 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| P8R57_RS13050 () | 2665434..2665601 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| P8R57_RS13055 () | 2665595..2665741 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| P8R57_RS13060 () | 2666242..2666367 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| P8R57_RS13065 () | 2666367..2666547 | + | 181 | Protein_2556 | IS3 family transposase | - |
| P8R57_RS13070 () | 2666937..2667137 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| P8R57_RS13075 () | 2667234..2667745 | - | 512 | Protein_2558 | tail fiber assembly protein | - |
| P8R57_RS13080 () | 2667758..2668045 | - | 288 | Protein_2559 | macro domain-containing protein | - |
| P8R57_RS13085 () | 2668055..2669286 | - | 1232 | Protein_2560 | tail fiber protein | - |
| P8R57_RS13090 () | 2669285..2669852 | - | 568 | Protein_2561 | phage terminase large subunit family protein | - |
| P8R57_RS13095 () | 2669839..2670330 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| P8R57_RS13100 () | 2670385..2670573 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| P8R57_RS13105 () | 2670638..2670805 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| P8R57_RS13110 () | 2671062..2671595 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| P8R57_RS13115 () | 2671649..2671840 | - | 192 | Protein_2566 | glycoside hydrolase family 19 protein | - |
| P8R57_RS13120 () | 2671829..2672290 | + | 462 | Protein_2567 | DNA breaking-rejoining protein | - |
| P8R57_RS13125 () | 2672554..2673476 | + | 923 | Protein_2568 | hypothetical protein ; Integrase | Integrase |
| P8R57_RS13130 () | 2674421..2675221 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| P8R57_RS13135 () | 2675250..2675491 | - | 242 | Protein_2570 | recombinase family protein | - |
| P8R57_RS13140 () | 2675701..2676423 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| P8R57_RS13145 () | 2676625..2676969 | - | 345 | Protein_2572 | tail fiber assembly protein | - |
| P8R57_RS13150 () | 2676974..2677837 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| P8R57_RS13155 () | 2677877..2680208 | - | 2332 | Protein_2574 | host specificity protein J | - |
| P8R57_RS13160 () | 2680208..2680468 | - | 261 | Protein_2575 | C40 family peptidase | - |
| P8R57_RS13165 () | 2680478..2681173 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| P8R57_RS13170 () | 2681263..2681796 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| P8R57_RS13175 () | 2681913..2682140 | - | 228 | Protein_2578 | Ail/Lom family outer membrane beta-barrel protein | - |
| P8R57_RS13180 () | 2682172..2682483 | - | 312 | Protein_2579 | DUF1441 family protein | - |
| P8R57_RS13185 () | 2682691..2683170 | - | 480 | WP_001541990.1 | lysis protein | - |
| P8R57_RS13190 () | 2683188..2683640 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| P8R57_RS13195 () | 2683624..2683953 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| P8R57_RS13200 () | 2684229..2684915 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| P8R57_RS13205 () | 2685276..2685725 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| P8R57_RS13210 () | 2686099..2686626 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| P8R57_RS13215 () | 2686720..2687409 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| P8R57_RS13220 () | 2687406..2687542 | - | 137 | Protein_2587 | YlcG family protein | - |
| P8R57_RS13225 () | 2687539..2687760 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| P8R57_RS13230 () | 2687763..2688362 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| P8R57_RS13235 () | 2688426..2688644 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| P8R57_RS13240 () | 2688946..2689044 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| P8R57_RS13245 () | 2689363..2691342 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| P8R57_RS13250 () | 2691756..2692034 | + | 279 | WP_001575998.1 | excisionase | - |
| P8R57_RS13255 () | 2692009..2693088 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693226..2693371 | + | 146 | - | - | Antitoxin Detail |
| - | 2693228..2693331 | - | 104 | - | - | Toxin Detail |
| P8R57_RS13260 () | 2693471..2693824 | - | 354 | WP_000722370.1 | YebY family protein | - |
| P8R57_RS13265 () | 2693841..2694716 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| P8R57_RS13270 () | 2694717..2695091 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| P8R57_RS13275 () | 2695229..2695459 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P8R57_RS13280 () | 2695567..2696223 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| P8R57_RS13285 () | 2696247..2696945 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| P8R57_RS13290 () | 2696982..2699033 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| P8R57_RS13295 () | 2699246..2699905 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| P8R57_RS13300 () | 2699999..2700352 | - | 354 | WP_001042123.1 | protein YebF | - |
| P8R57_RS13305 () | 2700420..2700710 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P8R57_RS13310 () | 2700841..2702019 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P8R57_RS13315 () | 2702119..2702760 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|