MGE detailed information
MGE type: Prophage MGE length: 33699 bp
Accession: NZ_CP121294 Location: 268..33966 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Accession: NZ_CP121294 Location: 268..33966 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9N54_RS00010 (268) | 268..678 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| P9N54_RS00015 (830) | 830..1003 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| P9N54_RS00020 (1175) | 1175..1405 | - | 231 | WP_000720962.1 | protein YnfN | - |
| P9N54_RS00025 (1410) | 1410..1475 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| P9N54_RS00030 (1478) | 1478..1666 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| P9N54_RS00035 (1677) | 1677..1889 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| P9N54_RS00040 (2252) | 2252..2749 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| P9N54_RS00045 (2746) | 2746..3279 | - | 534 | WP_001092971.1 | lysozyme | - |
| P9N54_RS00050 (3276) | 3276..3587 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| P9N54_RS00055 (3592) | 3592..3807 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| P9N54_RS00060 (4027) | 4027..4197 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| P9N54_RS00065 (4561) | 4561..4776 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| P9N54_RS00070 (5077) | 5077..5289 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| P9N54_RS00075 (5344) | 5344..5433 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| P9N54_RS00080 (5711) | 5711..6463 | - | 753 | WP_001047135.1 | antitermination protein | - |
| P9N54_RS00085 (6477) | 6477..7526 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| P9N54_RS00090 (7528) | 7528..7806 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| P9N54_RS00095 (7873) | 7873..8124 | - | 252 | WP_000980994.1 | protein Rem | - |
| P9N54_RS00100 (8341) | 8341..8496 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| P9N54_RS00105 (8568) | 8568..8855 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| P9N54_RS00110 (8855) | 8855..9094 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| P9N54_RS00115 (9119) | 9119..9424 | + | 306 | WP_001326990.1 | protein YdfV | - |
| P9N54_RS00120 (9627) | 9627..9959 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| P9N54_RS00125 (10396) | 10396..10545 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| P9N54_RS00130 (10666) | 10666..11688 | - | 1023 | Protein_25 | ISNCY family transposase ISCARN112 | Transposase |
| P9N54_RS00135 (12478) | 12478..12765 | - | 288 | Protein_26 | hypothetical protein | - |
| P9N54_RS00140 (13243) | 13243..13732 | - | 490 | Protein_27 | class I SAM-dependent methyltransferase | - |
| P9N54_RS00145 (13729) | 13729..14151 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| P9N54_RS00150 (14192) | 14192..15157 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| P9N54_RS00155 (15138) | 15138..15659 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| P9N54_RS00160 (15643) | 15643..15873 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| P9N54_RS00165 (15957) | 15957..16364 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| P9N54_RS00170 (16531) | 16531..16686 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| P9N54_RS00175 (16688) | 16688..16816 | + | 129 | WP_000344964.1 | protein YdfB | - |
| P9N54_RS00180 (16846) | 16846..17064 | + | 219 | WP_001171942.1 | protein YdfC | - |
| P9N54_RS00185 (17632) | 17632..17820 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| P9N54_RS00190 (17817) | 17817..18008 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| P9N54_RS00195 (18101) | 18101..20572 | + | 2472 | WP_040089035.1 | exonuclease | - |
| P9N54_RS00200 (20645) | 20645..20896 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| P9N54_RS00205 (20931) | 20931..22211 | + | 1281 | WP_000877001.1 | Putative defective protein IntQ ; Integrase | Integrase |
| P9N54_RS00210 (22399) | 22399..23418 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| P9N54_RS00215 (23430) | 23430..24644 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| P9N54_RS00220 (24850) | 24850..25176 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| P9N54_RS00225 (25311) | 25311..25652 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| P9N54_RS00230 (25687) | 25687..26247 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| P9N54_RS00235 (26250) | 26250..26960 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| P9N54_RS00240 (27068) | 27068..27373 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| P9N54_RS00245 (27572) | 27572..29998 | + | 2427 | WP_000041535.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| P9N54_RS00250 (30059) | 30059..32482 | + | 2424 | WP_097477210.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| P9N54_RS00255 (32493) | 32493..33110 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| P9N54_RS00260 (33112) | 33112..33966 | + | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| P9N54_RS00265 (34009) | 34009..34623 | + | 615 | WP_097477203.1 | Tat proofreading chaperone DmsD | - |
| P9N54_RS00270 (34782) | 34782..36074 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| P9N54_RS00275 (36027) | 36027..36722 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| P9N54_RS00280 (36847) | 36847..38067 | - | 1221 | WP_278233995.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|