MGE detailed information
MGE type: Prophage MGE length: 46781 bp
Accession: NZ_CP121003 Location: 2652243..2699023 Organism: Salmonella enterica strain 31A Replicon: chromosome
Accession: NZ_CP121003 Location: 2652243..2699023 Organism: Salmonella enterica strain 31A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6590_RS12960 () | 2647756..2648253 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| P6590_RS12965 () | 2648382..2649665 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| P6590_RS12970 () | 2649634..2652267 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| P6590_RS12975 () | 2652345..2653784 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P6590_RS12980 () | 2653902..2654138 | + | 237 | WP_024131108.1 | YebV family protein | - |
| P6590_RS12985 () | 2654249..2654440 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| P6590_RS12990 () | 2654459..2655109 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| P6590_RS12995 () | 2655333..2655497 | - | 165 | WP_001134856.1 | membrane protein | - |
| P6590_RS13000 () | 2655782..2656504 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P6590_RS13005 () | 2657188..2657583 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| P6590_RS13010 () | 2657913..2658389 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| P6590_RS13015 () | 2658762..2659181 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| P6590_RS13020 () | 2659554..2659823 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| P6590_RS13025 () | 2659989..2660129 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| P6590_RS13030 () | 2660275..2661482 | - | 1208 | Protein_2549 | IS256 family transposase ISEc39 | Transposase |
| P6590_RS13035 () | 2661552..2662018 | + | 467 | Protein_2550 | tyrosine-type recombinase/integrase | - |
| P6590_RS13040 () | 2663268..2664182 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| P6590_RS13045 () | 2664315..2664473 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P6590_RS13050 () | 2664483..2665097 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| P6590_RS13055 () | 2665424..2665591 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| P6590_RS13060 () | 2665585..2665731 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| P6590_RS13065 () | 2666232..2666357 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| P6590_RS13070 () | 2666357..2666537 | + | 181 | Protein_2557 | IS3 family transposase | - |
| P6590_RS13075 () | 2666927..2667127 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| P6590_RS13080 () | 2667224..2667735 | - | 512 | Protein_2559 | tail fiber assembly protein | - |
| P6590_RS13085 () | 2667748..2668035 | - | 288 | Protein_2560 | macro domain-containing protein | - |
| P6590_RS13090 () | 2668045..2669276 | - | 1232 | Protein_2561 | tail fiber protein | - |
| P6590_RS13095 () | 2669275..2669842 | - | 568 | Protein_2562 | phage terminase large subunit family protein | - |
| P6590_RS13100 () | 2669829..2670320 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| P6590_RS13105 () | 2670375..2670563 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| P6590_RS13110 () | 2670628..2670795 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| P6590_RS13115 () | 2671052..2671585 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| P6590_RS13120 () | 2671639..2671830 | - | 192 | Protein_2567 | glycoside hydrolase family 19 protein | - |
| P6590_RS13125 () | 2671819..2672280 | + | 462 | Protein_2568 | DNA breaking-rejoining protein | - |
| P6590_RS13130 () | 2672544..2673466 | + | 923 | Protein_2569 | hypothetical protein ; Integrase | Integrase |
| P6590_RS13135 () | 2674411..2675211 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| P6590_RS13140 () | 2675240..2675481 | - | 242 | Protein_2571 | recombinase family protein | - |
| P6590_RS13145 () | 2675691..2676413 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| P6590_RS13150 () | 2676615..2676959 | - | 345 | Protein_2573 | tail fiber assembly protein | - |
| P6590_RS13155 () | 2676964..2677827 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| P6590_RS13160 () | 2677867..2680198 | - | 2332 | Protein_2575 | host specificity protein J | - |
| P6590_RS13165 () | 2680198..2680458 | - | 261 | Protein_2576 | C40 family peptidase | - |
| P6590_RS13170 () | 2680468..2681163 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| P6590_RS13175 () | 2681253..2681786 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| P6590_RS13180 () | 2681903..2682130 | - | 228 | Protein_2579 | Ail/Lom family outer membrane beta-barrel protein | - |
| P6590_RS13185 () | 2682162..2682473 | - | 312 | Protein_2580 | DUF1441 family protein | - |
| P6590_RS13190 () | 2682681..2683160 | - | 480 | WP_001541990.1 | lysis protein | - |
| P6590_RS13195 () | 2683178..2683630 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| P6590_RS13200 () | 2683614..2683943 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| P6590_RS13205 () | 2684219..2684905 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| P6590_RS13210 () | 2685266..2685715 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| P6590_RS13215 () | 2686089..2686616 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| P6590_RS13220 () | 2686710..2687399 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| P6590_RS13225 () | 2687396..2687532 | - | 137 | Protein_2588 | YlcG family protein | - |
| P6590_RS13230 () | 2687529..2687750 | - | 222 | WP_254888507.1 | recombination protein NinG | - |
| P6590_RS13235 () | 2687753..2688352 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| P6590_RS13240 () | 2688416..2688634 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| P6590_RS13245 () | 2688936..2689034 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| P6590_RS13250 () | 2689353..2691332 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| P6590_RS13255 () | 2691746..2692024 | + | 279 | WP_001575998.1 | excisionase | - |
| P6590_RS13260 () | 2691999..2693078 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693216..2693361 | + | 146 | - | - | Antitoxin Detail |
| - | 2693218..2693321 | - | 104 | - | - | Toxin Detail |
| P6590_RS13265 () | 2693461..2693814 | - | 354 | WP_000722370.1 | YebY family protein | - |
| P6590_RS13270 () | 2693831..2694706 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| P6590_RS13275 () | 2694707..2695081 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| P6590_RS13280 () | 2695219..2695449 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P6590_RS13285 () | 2695557..2696213 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| P6590_RS13290 () | 2696237..2696935 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| P6590_RS13295 () | 2696972..2699023 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| P6590_RS13300 () | 2699236..2699895 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| P6590_RS13305 () | 2699989..2700342 | - | 354 | WP_001042123.1 | protein YebF | - |
| P6590_RS13310 () | 2700410..2700700 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P6590_RS13315 () | 2700831..2702009 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P6590_RS13320 () | 2702109..2702750 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|