MGE detailed information
MGE type: Genomic_island MGE length: 9928 bp
Accession: NZ_CP120396 Location: 951766..961693 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CO_04 Replicon: chromosome
Accession: NZ_CP120396 Location: 951766..961693 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CO_04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA80_RS04465 (PVA80_04465) | 947912..948295 | + | 384 | WP_001070468.1 | DUF4440 domain-containing protein | - |
| PVA80_RS04470 (PVA80_04470) | 948351..950918 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PVA80_RS04475 (PVA80_04475) | 951076..951596 | + | 521 | Protein_874 | cytoplasmic protein | - |
| PVA80_RS04480 (PVA80_04480) | 951766..952422 | - | 657 | WP_000420463.1 | protein-serine/threonine phosphatase | - |
| PVA80_RS04485 (PVA80_04485) | 952649..953070 | + | 422 | Protein_876 | IS5/IS1182 family transposase | - |
| PVA80_RS04490 (PVA80_04490) | 953143..953670 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PVA80_RS04495 (PVA80_04495) | 953667..953957 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PVA80_RS04500 (PVA80_04500) | 954227..954427 | - | 201 | Protein_879 | transposase | - |
| PVA80_RS04505 (PVA80_04505) | 954831..955274 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| PVA80_RS04510 (PVA80_04510) | 955730..956380 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PVA80_RS04515 (PVA80_04515) | 956377..958065 | + | 1689 | WP_000848103.1 | Type 3 secretion system secretin | VF |
| PVA80_RS04520 (PVA80_04520) | 958062..959180 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| PVA80_RS04525 (PVA80_04525) | 959205..961262 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PVA80_RS04530 (PVA80_04530) | 961286..961693 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PVA80_RS04535 (PVA80_04535) | 961690..962985 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PVA80_RS04540 (PVA80_04540) | 962963..963406 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PVA80_RS04545 (PVA80_04545) | 963406..964416 | + | 1011 | WP_000503113.1 | SPI-1 type III secretion system protein SpaN | - |
| PVA80_RS04550 (PVA80_04550) | 964416..965327 | + | 912 | WP_000058738.1 | SPI-1 type III secretion system protein SpaO | - |
| PVA80_RS04555 (PVA80_04555) | 965317..965991 | + | 675 | WP_000526019.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PVA80_RS04560 (PVA80_04560) | 966017..966277 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|