NZ_CP1203954111328..4244244

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP120395        Location: 4111328..4244244         Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CI       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVA70_RS20345 (PVA70_20340) 4107127..4108428 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PVA70_RS20350 (PVA70_20345) 4108549..4108896 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PVA70_RS20355 (PVA70_20350) 4108872..4110575 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PVA70_RS20360 (PVA70_20355) 4110612..4111187 + 576 WP_001188506.1 transcriptional regulator -
PVA70_RS20370 (PVA70_20365) 4111538..4112797 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PVA70_RS20375 (PVA70_20370) 4113108..4114391 + 1284 WP_000975154.1 SH3 domain-containing protein -
PVA70_RS20380 (PVA70_20375) 4114476..4114745 + 270 Protein_3993 integrase -
PVA70_RS20385 (PVA70_20380) 4115372..4116154 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PVA70_RS20390 (PVA70_20385) 4116424..4116618 + 195 WP_162009227.1 hypothetical protein -
PVA70_RS20395 (PVA70_20390) 4117011..4117232 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PVA70_RS20400 (PVA70_20395) 4117229..4117690 - 462 WP_000246267.1 hypothetical protein -
PVA70_RS20405 (PVA70_20400) 4118237..4119910 + 1674 WP_010989301.1 hypothetical protein -
PVA70_RS20410 (PVA70_20405) 4119991..4122276 + 2286 WP_010989300.1 hypothetical protein -
PVA70_RS20415 (PVA70_20410) 4122580..4122831 + 252 WP_024131240.1 hypothetical protein -
PVA70_RS20420 (PVA70_20415) 4122913..4123365 + 453 WP_000434168.1 hypothetical protein -
PVA70_RS20425 (PVA70_20420) 4123545..4124033 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PVA70_RS20430 (PVA70_20425) 4124030..4124323 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PVA70_RS20435 (PVA70_20430) 4124750..4125763 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA70_RS20440 (PVA70_20435) 4125927..4127516 - 1590 WP_000488995.1 TraI domain-containing protein -
PVA70_RS20445 (PVA70_20440) 4127500..4129011 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PVA70_RS20450 (PVA70_20445) 4129865..4130404 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PVA70_RS20455 (PVA70_20450) 4130649..4131926 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PVA70_RS20460 (PVA70_20455) 4131929..4132975 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PVA70_RS20465 (PVA70_20460) 4132999..4135494 + 2496 WP_010989299.1 hypothetical protein VF
PVA70_RS20470 (PVA70_20465) 4135494..4137230 + 1737 WP_000632616.1 hypothetical protein VF
PVA70_RS20475 (PVA70_20470) 4137275..4138342 + 1068 WP_000720235.1 hypothetical protein VF
PVA70_RS20480 (PVA70_20475) 4138352..4139146 + 795 WP_001023498.1 hypothetical protein VF
PVA70_RS20485 (PVA70_20480) 4139172..4139867 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PVA70_RS20490 (PVA70_20485) 4139890..4141194 + 1305 WP_000431675.1 hypothetical protein VF
PVA70_RS20495 (PVA70_20490) 4141214..4143184 + 1971 WP_000052242.1 hypothetical protein VF
PVA70_RS20500 (PVA70_20495) 4143486..4144232 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PVA70_RS20505 (PVA70_20500) 4144232..4145122 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PVA70_RS20510 (PVA70_20505) 4145133..4145390 - 258 WP_001681810.1 YjhX family toxin -
PVA70_RS20515 (PVA70_20510) 4145692..4145802 - 111 Protein_4020 autoinducer 2 ABC transporter substrate-binding protein -
PVA70_RS20520 (PVA70_20515) 4146037..4146381 + 345 Protein_4021 translesion error-prone DNA polymerase V autoproteolytic subunit -
PVA70_RS20525 (PVA70_20520) 4146497..4147522 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA70_RS20530 (PVA70_20525) 4147526..4148158 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PVA70_RS20535 (PVA70_20530) 4148275..4148517 + 243 WP_000102106.1 Rha family transcriptional regulator -
PVA70_RS20540 (PVA70_20535) 4148550..4149059 + 510 WP_000460852.1 phage regulatory CII family protein -
PVA70_RS20545 (PVA70_20540) 4149067..4149267 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PVA70_RS20550 (PVA70_20545) 4149231..4149572 + 342 WP_000963479.1 DUF5347 family protein -
PVA70_RS20555 (PVA70_20550) 4149640..4149873 + 234 WP_001244240.1 DUF2732 family protein -
PVA70_RS20560 (PVA70_20555) 4149873..4150100 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PVA70_RS20565 (PVA70_20560) 4150097..4150681 + 585 WP_001090717.1 exonuclease domain-containing protein -
PVA70_RS20570 (PVA70_20565) 4150678..4151538 + 861 WP_000104130.1 DNA adenine methylase -
PVA70_RS20575 (PVA70_20570) 4151529..4153937 + 2409 WP_000301193.1 replication endonuclease -
PVA70_RS20580 (PVA70_20575) 4154105..4154293 + 189 WP_001154438.1 hypothetical protein -
PVA70_RS20585 (PVA70_20580) 4154305..4154538 + 234 WP_001217561.1 DinI family protein -
PVA70_RS20590 (PVA70_20585) 4154634..4154852 + 219 WP_000835188.1 hypothetical protein -
PVA70_RS20595 (PVA70_20590) 4154862..4155926 + 1065 WP_000829584.1 hypothetical protein -
PVA70_RS20600 (PVA70_20595) 4155923..4156987 + 1065 WP_000789323.1 hypothetical protein -
PVA70_RS20605 (PVA70_20600) 4157007..4157702 + 696 WP_000080839.1 hypothetical protein -
PVA70_RS20610 (PVA70_20605) 4157751..4158794 - 1044 WP_285238736.1 phage portal protein -
PVA70_RS20615 (PVA70_20610) 4158794..4160560 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PVA70_RS20620 (PVA70_20615) 4160703..4161536 + 834 WP_285238737.1 GPO family capsid scaffolding protein -
PVA70_RS20625 (PVA70_20620) 4161553..4162617 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PVA70_RS20630 (PVA70_20625) 4162621..4163271 + 651 WP_000059175.1 terminase endonuclease subunit -
PVA70_RS20635 (PVA70_20630) 4163365..4163829 + 465 WP_000673540.1 head completion/stabilization protein -
PVA70_RS20640 (PVA70_20635) 4163829..4164032 + 204 WP_000868184.1 tail protein X -
PVA70_RS20645 (PVA70_20640) 4164036..4164251 + 216 WP_000171566.1 HP1 family phage holin -
PVA70_RS20650 (PVA70_20645) 4164232..4164741 + 510 WP_001097942.1 lysozyme -
PVA70_RS20655 (PVA70_20650) 4164746..4165123 + 378 WP_000731034.1 DNZ54_00345 family protein -
PVA70_RS20660 (PVA70_20655) 4165120..4165548 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PVA70_RS20665 (PVA70_20660) 4165433..4165681 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PVA70_RS20670 (PVA70_20665) 4165644..4166075 + 432 WP_001039961.1 phage tail protein -
PVA70_RS20675 (PVA70_20670) 4166068..4166514 + 447 WP_000343944.1 phage virion morphogenesis protein -
PVA70_RS20680 (PVA70_20675) 4166583..4167161 + 579 WP_000993749.1 phage baseplate assembly protein V -
PVA70_RS20685 (PVA70_20680) 4167158..4167517 + 360 WP_000177408.1 GPW/gp25 family protein -
PVA70_RS20690 (PVA70_20685) 4167504..4168412 + 909 WP_000268327.1 baseplate assembly protein -
PVA70_RS20695 (PVA70_20690) 4168405..4169010 + 606 WP_001086816.1 phage tail protein I -
PVA70_RS20700 (PVA70_20695) 4169007..4170626 + 1620 WP_000104806.1 phage tail protein -
PVA70_RS20705 (PVA70_20700) 4170633..4171040 + 408 WP_000006337.1 tail fiber assembly protein -
PVA70_RS20710 (PVA70_20705) 4171238..4171960 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PVA70_RS20715 (PVA70_20710) 4172171..4172392 + 222 Protein_4060 helix-turn-helix domain-containing protein -
PVA70_RS20720 (PVA70_20715) 4172495..4173667 + 1173 WP_000046101.1 phage tail sheath protein -
PVA70_RS20725 (PVA70_20720) 4173677..4174192 + 516 WP_001207653.1 phage major tail tube protein -
PVA70_RS20730 (PVA70_20725) 4174247..4174549 + 303 WP_001280965.1 phage tail assembly protein -
PVA70_RS20735 (PVA70_20730) 4174564..4174683 + 120 WP_000763315.1 GpE family phage tail protein -
PVA70_RS20740 (PVA70_20735) 4174676..4177456 + 2781 WP_001282813.1 phage tail tape measure protein -
PVA70_RS20745 (PVA70_20740) 4177456..4177941 + 486 WP_000980405.1 phage tail protein -
PVA70_RS20750 (PVA70_20745) 4177938..4179038 + 1101 WP_001011750.1 phage late control D family protein -
PVA70_RS20755 (PVA70_20750) 4179106..4179324 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PVA70_RS20760 (PVA70_20755) 4179411..4179788 - 378 WP_001039750.1 hypothetical protein -
PVA70_RS20765 (PVA70_20760) 4179922..4180008 + 87 Protein_4070 peptidase -
PVA70_RS20770 (PVA70_20765) 4180008..4181282 + 1275 WP_000457555.1 Y-family DNA polymerase -
PVA70_RS20775 (PVA70_20770) 4181414..4181683 + 270 WP_001222413.1 hypothetical protein -
PVA70_RS20780 (PVA70_20775) 4181783..4182109 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PVA70_RS20785 (PVA70_20780) 4182184..4183083 - 900 WP_000022217.1 hypothetical protein -
PVA70_RS20790 (PVA70_20785) 4183157..4184065 - 909 WP_000881183.1 hypothetical protein -
PVA70_RS20795 (PVA70_20790) 4184137..4186086 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PVA70_RS20800 (PVA70_20795) 4186175..4186633 - 459 WP_000115421.1 hypothetical protein -
PVA70_RS20805 (PVA70_20800) 4186711..4187007 - 297 WP_000968700.1 hypothetical protein -
PVA70_RS20810 (PVA70_20805) 4187004..4187456 - 453 WP_000979718.1 hypothetical protein -
PVA70_RS20815 (PVA70_20810) 4187474..4187683 - 210 WP_000018145.1 hypothetical protein -
PVA70_RS20820 (PVA70_20815) 4188054..4188434 - 381 WP_001103837.1 hypothetical protein -
PVA70_RS20825 (PVA70_20820) 4188530..4188832 - 303 WP_001020123.1 hypothetical protein -
PVA70_RS20830 (PVA70_20825) 4189556..4190476 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PVA70_RS20835 (PVA70_20830) 4191742..4192284 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PVA70_RS20840 (PVA70_20835) 4192495..4193136 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PVA70_RS20845 (PVA70_20840) 4193121..4194368 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PVA70_RS20850 (PVA70_20845) 4194656..4195015 + 360 WP_010989293.1 hypothetical protein -
PVA70_RS20855 (PVA70_20850) 4195239..4195628 + 390 WP_000993574.1 hypothetical protein -
PVA70_RS20860 (PVA70_20855) 4195664..4197169 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PVA70_RS20865 (PVA70_20860) 4197502..4198899 - 1398 WP_014341560.1 integrating conjugative element protein -
PVA70_RS20870 (PVA70_20865) 4198947..4199915 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PVA70_RS20875 (PVA70_20870) 4199912..4200304 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PVA70_RS20880 (PVA70_20875) 4200459..4200845 - 387 WP_000054770.1 hypothetical protein -
PVA70_RS20885 (PVA70_20880) 4201000..4203716 - 2717 Protein_4094 conjugative transfer ATPase -
PVA70_RS20890 (PVA70_20885) 4203836..4204285 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PVA70_RS20895 (PVA70_20890) 4204272..4205750 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PVA70_RS20900 (PVA70_20895) 4205740..4206639 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PVA70_RS20905 (PVA70_20900) 4206639..4207292 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PVA70_RS20910 (PVA70_20905) 4207289..4207663 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PVA70_RS20915 (PVA70_20910) 4207673..4208038 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PVA70_RS20920 (PVA70_20915) 4208065..4208304 - 240 WP_001251281.1 TIGR03758 family integrating conjugative element protein -
PVA70_RS20925 (PVA70_20920) 4208304..4208558 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PVA70_RS20930 (PVA70_20925) 4208795..4209553 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PVA70_RS20935 (PVA70_20930) 4209550..4211640 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PVA70_RS20940 (PVA70_20935) 4211660..4212229 - 570 WP_000626967.1 restriction endonuclease -
PVA70_RS20945 (PVA70_20940) 4212239..4212739 - 501 WP_000253629.1 integrating conjugative element protein -
PVA70_RS20950 (PVA70_20945) 4212775..4213461 - 687 WP_000013624.1 hypothetical protein VF
PVA70_RS20955 (PVA70_20950) 4213440..4214180 - 741 WP_001768408.1 TIGR03759 family integrating conjugative element protein -
PVA70_RS20960 (PVA70_20955) 4214199..4215113 - 915 WP_000214158.1 hypothetical protein -
PVA70_RS20965 (PVA70_20960) 4215070..4215432 - 363 WP_001149494.1 hypothetical protein -
PVA70_RS20970 (PVA70_20965) 4215620..4216495 - 876 WP_000994659.1 hypothetical protein -
PVA70_RS20975 (PVA70_20970) 4216707..4217174 - 468 WP_000455463.1 hypothetical protein -
PVA70_RS20980 (PVA70_20975) 4217271..4218422 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA70_RS20985 (PVA70_20980) 4218770..4220077 - 1308 WP_000744276.1 hypothetical protein VF
PVA70_RS20990 (PVA70_20985) 4220074..4220736 - 663 WP_000218700.1 hypothetical protein VF
PVA70_RS20995 (PVA70_20990) 4220733..4221176 - 444 WP_223228896.1 hypothetical protein VF
PVA70_RS21000 (PVA70_20995) 4221219..4221815 - 597 WP_024131234.1 hypothetical protein VF
PVA70_RS21005 (PVA70_21000) 4221854..4222939 - 1086 WP_000074784.1 hypothetical protein VF
PVA70_RS21010 (PVA70_21005) 4222936..4224651 - 1716 WP_001289222.1 hypothetical protein VF
PVA70_RS21015 (PVA70_21010) 4224661..4225041 - 381 WP_014341558.1 hypothetical protein VF
PVA70_RS21020 (PVA70_21015) 4225229..4226515 - 1287 WP_000763621.1 hypothetical protein VF
PVA70_RS21025 (PVA70_21020) 4226517..4226855 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PVA70_RS21030 (PVA70_21025) 4226821..4227705 - 885 WP_234828522.1 hypothetical protein VF
PVA70_RS21035 (PVA70_21030) 4228227..4228646 - 420 WP_000539682.1 hypothetical protein VF
PVA70_RS21040 (PVA70_21035) 4228649..4229893 - 1245 WP_001095932.1 hypothetical protein VF
PVA70_RS21045 (PVA70_21040) 4230058..4231008 - 951 Protein_4126 ISNCY family transposase ISPlu22 VF
PVA70_RS21050 (PVA70_21045) 4231074..4231610 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PVA70_RS21055 (PVA70_21050) 4231623..4231841 - 219 WP_000958171.1 hypothetical protein -
PVA70_RS21060 (PVA70_21055) 4231922..4232371 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PVA70_RS21065 (PVA70_21060) 4233039..4235033 - 1995 WP_001241572.1 DNA topoisomerase III -
PVA70_RS21070 (PVA70_21065) 4235144..4235920 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PVA70_RS21075 (PVA70_21070) 4236509..4237819 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PVA70_RS21080 (PVA70_21075) 4237849..4238097 - 249 WP_000377625.1 hypothetical protein -
PVA70_RS21085 (PVA70_21080) 4238097..4238654 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PVA70_RS21090 (PVA70_21085) 4238739..4239461 - 723 WP_285239045.1 DUF2786 domain-containing protein -
PVA70_RS21095 (PVA70_21090) 4239448..4239708 - 261 WP_000838568.1 hypothetical protein -
PVA70_RS21100 (PVA70_21095) 4239922..4241721 - 1800 WP_001029724.1 ParB family protein -
PVA70_RS21105 (PVA70_21100) 4241714..4243078 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PVA70_RS21110 (PVA70_21105) 4243075..4244109 - 1035 WP_001195363.1 hypothetical protein VF
PVA70_RS21115 (PVA70_21115) 4244777..4244854 + 78 Protein_4140 porin family protein -
PVA70_RS21120 (PVA70_21120) 4244954..4245706 + 753 WP_001785756.1 non-specific acid phosphatase -
PVA70_RS21125 (PVA70_21125) 4245947..4246438 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PVA70_RS21130 (PVA70_21130) 4246435..4246728 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PVA70_RS21135 (PVA70_21135) 4247045..4247267 + 223 Protein_4144 hypothetical protein -
PVA70_RS21140 (PVA70_21140) 4247533..4248408 + 876 WP_000921674.1 AraC family transcriptional regulator -
PVA70_RS21145 (PVA70_21145) 4248405..4248692 + 288 WP_001269916.1 transcriptional regulator RtsB -
PVA70_RS21150 (PVA70_21150) 4248715..4248931 + 217 Protein_4147 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance