NZ_CP1203944113622..4246568

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132947 bp
Accession: NZ_CP120394        Location: 4113622..4246568         Organism: Salmonella enterica subsp. enterica serovar Typhi strain 2027-2019_CI       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVA73_RS20300 (PVA73_20295) 4109421..4110722 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PVA73_RS20305 (PVA73_20300) 4110843..4111190 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PVA73_RS20310 (PVA73_20305) 4111166..4112869 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PVA73_RS20315 (PVA73_20310) 4112906..4113481 + 576 WP_001188506.1 transcriptional regulator -
PVA73_RS20325 (PVA73_20320) 4113832..4115091 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PVA73_RS20330 (PVA73_20325) 4115402..4116685 + 1284 WP_000975154.1 SH3 domain-containing protein -
PVA73_RS20335 (PVA73_20330) 4116770..4117039 + 270 Protein_3982 integrase -
PVA73_RS20340 (PVA73_20335) 4117666..4118448 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PVA73_RS20345 (PVA73_20340) 4118718..4118912 + 195 WP_162009227.1 hypothetical protein -
PVA73_RS20350 (PVA73_20345) 4119305..4119526 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PVA73_RS20355 (PVA73_20350) 4119523..4119984 - 462 WP_000246267.1 hypothetical protein -
PVA73_RS20360 (PVA73_20355) 4120531..4122204 + 1674 WP_010989301.1 hypothetical protein -
PVA73_RS20365 (PVA73_20360) 4122285..4124570 + 2286 WP_010989300.1 hypothetical protein -
PVA73_RS20370 (PVA73_20365) 4124874..4125125 + 252 WP_024131240.1 hypothetical protein -
PVA73_RS20375 (PVA73_20370) 4125207..4125659 + 453 WP_000434168.1 hypothetical protein -
PVA73_RS20380 (PVA73_20375) 4125839..4126327 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PVA73_RS20385 (PVA73_20380) 4126324..4126617 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PVA73_RS20390 (PVA73_20385) 4127044..4128057 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA73_RS20395 (PVA73_20390) 4128221..4129810 - 1590 WP_000488995.1 TraI domain-containing protein -
PVA73_RS20400 (PVA73_20395) 4129794..4131305 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PVA73_RS20405 (PVA73_20400) 4132159..4132698 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PVA73_RS20410 (PVA73_20405) 4132943..4134220 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PVA73_RS20415 (PVA73_20410) 4134223..4135269 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PVA73_RS20420 (PVA73_20415) 4135293..4137788 + 2496 WP_010989299.1 hypothetical protein VF
PVA73_RS20425 (PVA73_20420) 4137788..4139524 + 1737 WP_000632616.1 hypothetical protein VF
PVA73_RS20430 (PVA73_20425) 4139569..4140636 + 1068 WP_000720235.1 hypothetical protein VF
PVA73_RS20435 (PVA73_20430) 4140646..4141440 + 795 WP_001023498.1 hypothetical protein VF
PVA73_RS20440 (PVA73_20435) 4141466..4142161 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PVA73_RS20445 (PVA73_20440) 4142184..4143488 + 1305 WP_000431675.1 hypothetical protein VF
PVA73_RS20450 (PVA73_20445) 4143508..4145478 + 1971 WP_000052242.1 hypothetical protein VF
PVA73_RS20455 (PVA73_20450) 4145780..4146526 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PVA73_RS20460 (PVA73_20455) 4146526..4147416 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PVA73_RS20465 (PVA73_20460) 4147427..4147684 - 258 WP_001681810.1 YjhX family toxin -
PVA73_RS20470 (PVA73_20465) 4147986..4148096 - 111 Protein_4009 autoinducer 2 ABC transporter substrate-binding protein -
PVA73_RS20475 (PVA73_20470) 4148331..4148675 + 345 Protein_4010 translesion error-prone DNA polymerase V autoproteolytic subunit -
PVA73_RS20480 (PVA73_20475) 4148791..4149816 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA73_RS20485 (PVA73_20480) 4149820..4150452 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PVA73_RS20490 (PVA73_20485) 4150569..4150811 + 243 WP_000102106.1 Rha family transcriptional regulator -
PVA73_RS20495 (PVA73_20490) 4150844..4151353 + 510 WP_000460852.1 phage regulatory CII family protein -
PVA73_RS20500 (PVA73_20495) 4151361..4151561 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PVA73_RS20505 (PVA73_20500) 4151525..4151866 + 342 WP_000963479.1 DUF5347 family protein -
PVA73_RS20510 (PVA73_20505) 4151934..4152167 + 234 WP_001244240.1 DUF2732 family protein -
PVA73_RS20515 (PVA73_20510) 4152167..4152394 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PVA73_RS20520 (PVA73_20515) 4152391..4152975 + 585 WP_001090717.1 exonuclease domain-containing protein -
PVA73_RS20525 (PVA73_20520) 4152972..4153832 + 861 WP_000104130.1 DNA adenine methylase -
PVA73_RS20530 (PVA73_20525) 4153823..4156292 + 2470 Protein_4021 replication endonuclease -
PVA73_RS20535 (PVA73_20530) 4156460..4156648 + 189 WP_001154438.1 hypothetical protein -
PVA73_RS20540 (PVA73_20535) 4156660..4156893 + 234 WP_001217561.1 DinI family protein -
PVA73_RS20545 (PVA73_20540) 4156989..4157207 + 219 WP_000835188.1 hypothetical protein -
PVA73_RS20550 (PVA73_20545) 4157217..4158281 + 1065 WP_000829584.1 hypothetical protein -
PVA73_RS20555 (PVA73_20550) 4158278..4159342 + 1065 WP_000789323.1 hypothetical protein -
PVA73_RS20560 (PVA73_20555) 4159362..4160057 + 696 WP_000080839.1 hypothetical protein -
PVA73_RS20565 (PVA73_20560) 4160106..4161149 - 1044 WP_001681813.1 phage portal protein -
PVA73_RS20570 (PVA73_20565) 4161149..4162915 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PVA73_RS20575 (PVA73_20570) 4163058..4163891 + 834 WP_000216272.1 GPO family capsid scaffolding protein -
PVA73_RS20580 (PVA73_20575) 4163908..4164972 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PVA73_RS20585 (PVA73_20580) 4164976..4165626 + 651 WP_000059175.1 terminase endonuclease subunit -
PVA73_RS20590 (PVA73_20585) 4165720..4166184 + 465 WP_000673540.1 head completion/stabilization protein -
PVA73_RS20595 (PVA73_20590) 4166184..4166387 + 204 WP_000868184.1 tail protein X -
PVA73_RS20600 (PVA73_20595) 4166391..4166606 + 216 WP_000171566.1 HP1 family phage holin -
PVA73_RS20605 (PVA73_20600) 4166587..4167096 + 510 WP_001097942.1 lysozyme -
PVA73_RS20610 (PVA73_20605) 4167101..4167478 + 378 WP_048663627.1 DNZ54_00345 family protein -
PVA73_RS20615 (PVA73_20610) 4167475..4167903 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PVA73_RS20620 (PVA73_20615) 4167788..4168036 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PVA73_RS20625 (PVA73_20620) 4167999..4168430 + 432 WP_001039966.1 phage tail protein -
PVA73_RS20630 (PVA73_20625) 4168423..4168869 + 447 WP_000343944.1 phage virion morphogenesis protein -
PVA73_RS20635 (PVA73_20630) 4168938..4169516 + 579 WP_000993749.1 phage baseplate assembly protein V -
PVA73_RS20640 (PVA73_20635) 4169513..4169872 + 360 WP_000177408.1 GPW/gp25 family protein -
PVA73_RS20645 (PVA73_20640) 4169859..4170767 + 909 WP_000268327.1 baseplate assembly protein -
PVA73_RS20650 (PVA73_20645) 4170760..4171365 + 606 WP_001086816.1 phage tail protein I -
PVA73_RS20655 (PVA73_20650) 4171362..4172981 + 1620 WP_000104806.1 phage tail protein -
PVA73_RS20660 (PVA73_20655) 4172988..4173395 + 408 WP_000006337.1 tail fiber assembly protein -
PVA73_RS20665 (PVA73_20660) 4173593..4174315 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PVA73_RS20670 (PVA73_20665) 4174526..4174747 + 222 Protein_4049 helix-turn-helix domain-containing protein -
PVA73_RS20675 (PVA73_20670) 4174850..4176022 + 1173 WP_000046101.1 phage tail sheath protein -
PVA73_RS20680 (PVA73_20675) 4176032..4176547 + 516 WP_001207653.1 phage major tail tube protein -
PVA73_RS20685 (PVA73_20680) 4176602..4176904 + 303 WP_001280965.1 phage tail assembly protein -
PVA73_RS20690 (PVA73_20685) 4176919..4177038 + 120 WP_000763315.1 GpE family phage tail protein -
PVA73_RS20695 (PVA73_20690) 4177031..4179811 + 2781 WP_001282813.1 phage tail tape measure protein -
PVA73_RS20700 (PVA73_20695) 4179811..4180296 + 486 WP_000980405.1 phage tail protein -
PVA73_RS20705 (PVA73_20700) 4180293..4181393 + 1101 WP_001011750.1 phage late control D family protein -
PVA73_RS20710 (PVA73_20705) 4181461..4181679 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PVA73_RS20715 (PVA73_20710) 4181766..4182143 - 378 WP_001039750.1 hypothetical protein -
PVA73_RS20720 (PVA73_20715) 4182277..4182363 + 87 Protein_4059 peptidase -
PVA73_RS20725 (PVA73_20720) 4182363..4183637 + 1275 WP_000457555.1 Y-family DNA polymerase -
PVA73_RS20730 (PVA73_20725) 4183769..4184038 + 270 WP_001222413.1 hypothetical protein -
PVA73_RS20735 (PVA73_20730) 4184138..4184464 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PVA73_RS20740 (PVA73_20735) 4184539..4185438 - 900 WP_000022217.1 hypothetical protein -
PVA73_RS20745 (PVA73_20740) 4185512..4186420 - 909 WP_000881183.1 hypothetical protein -
PVA73_RS20750 (PVA73_20745) 4186492..4188441 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PVA73_RS20755 (PVA73_20750) 4188530..4188988 - 459 WP_000115421.1 hypothetical protein -
PVA73_RS20760 (PVA73_20755) 4189066..4189362 - 297 WP_000968700.1 hypothetical protein -
PVA73_RS20765 (PVA73_20760) 4189359..4189811 - 453 WP_000979718.1 hypothetical protein -
PVA73_RS20770 (PVA73_20765) 4189829..4190038 - 210 WP_000018145.1 hypothetical protein -
PVA73_RS20775 (PVA73_20770) 4190409..4190789 - 381 WP_001103837.1 hypothetical protein -
PVA73_RS20780 (PVA73_20775) 4190885..4191187 - 303 WP_001020123.1 hypothetical protein -
PVA73_RS20785 (PVA73_20780) 4191911..4192831 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PVA73_RS20790 (PVA73_20785) 4194097..4194639 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PVA73_RS20795 (PVA73_20790) 4194850..4195491 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PVA73_RS20800 (PVA73_20795) 4195476..4196723 - 1248 WP_050186976.1 phosphoadenosine phosphosulfate reductase -
PVA73_RS20805 (PVA73_20800) 4197011..4197370 + 360 WP_010989293.1 hypothetical protein -
PVA73_RS20810 (PVA73_20805) 4197594..4197983 + 390 WP_000993574.1 hypothetical protein -
PVA73_RS20815 (PVA73_20810) 4198019..4199524 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PVA73_RS20820 (PVA73_20815) 4199857..4201254 - 1398 WP_014341560.1 integrating conjugative element protein -
PVA73_RS20825 (PVA73_20820) 4201302..4202270 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PVA73_RS20830 (PVA73_20825) 4202267..4202659 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PVA73_RS20835 (PVA73_20830) 4202814..4203200 - 387 WP_000054770.1 hypothetical protein -
PVA73_RS20840 (PVA73_20835) 4203355..4206037 - 2683 Protein_4083 conjugative transfer ATPase -
PVA73_RS20845 (PVA73_20840) 4206160..4206609 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PVA73_RS20850 (PVA73_20845) 4206596..4208074 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PVA73_RS20855 (PVA73_20850) 4208064..4208963 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PVA73_RS20860 (PVA73_20855) 4208963..4209616 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PVA73_RS20865 (PVA73_20860) 4209613..4209987 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PVA73_RS20870 (PVA73_20865) 4209997..4210362 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PVA73_RS20875 (PVA73_20870) 4210389..4210622 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PVA73_RS20880 (PVA73_20875) 4210628..4210882 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PVA73_RS20885 (PVA73_20880) 4211119..4211877 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PVA73_RS20890 (PVA73_20885) 4211874..4213964 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PVA73_RS20895 (PVA73_20890) 4213984..4214553 - 570 WP_000626967.1 restriction endonuclease -
PVA73_RS20900 (PVA73_20895) 4214563..4215063 - 501 WP_000253629.1 integrating conjugative element protein -
PVA73_RS20905 (PVA73_20900) 4215099..4215785 - 687 WP_000013624.1 hypothetical protein VF
PVA73_RS20910 (PVA73_20905) 4215764..4216504 - 741 WP_001768408.1 TIGR03759 family integrating conjugative element protein -
PVA73_RS20915 (PVA73_20910) 4216523..4217437 - 915 WP_000214158.1 hypothetical protein -
PVA73_RS20920 (PVA73_20915) 4217394..4217756 - 363 WP_001149494.1 hypothetical protein -
PVA73_RS20925 (PVA73_20920) 4217944..4218819 - 876 WP_000994659.1 hypothetical protein -
PVA73_RS20930 (PVA73_20925) 4219031..4219498 - 468 WP_000455463.1 hypothetical protein -
PVA73_RS20935 (PVA73_20930) 4219595..4220746 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA73_RS20940 (PVA73_20935) 4221094..4222401 - 1308 WP_000744276.1 hypothetical protein VF
PVA73_RS20945 (PVA73_20940) 4222398..4223060 - 663 WP_000218700.1 hypothetical protein VF
PVA73_RS20950 (PVA73_20945) 4223057..4223500 - 444 WP_223228896.1 hypothetical protein VF
PVA73_RS20955 (PVA73_20950) 4223543..4224139 - 597 WP_024131234.1 hypothetical protein VF
PVA73_RS20960 (PVA73_20955) 4224178..4225263 - 1086 WP_000074784.1 hypothetical protein VF
PVA73_RS20965 (PVA73_20960) 4225260..4226975 - 1716 WP_001289222.1 hypothetical protein VF
PVA73_RS20970 (PVA73_20965) 4226985..4227365 - 381 WP_014341558.1 hypothetical protein VF
PVA73_RS20975 (PVA73_20970) 4227553..4228839 - 1287 WP_000763621.1 hypothetical protein VF
PVA73_RS20980 (PVA73_20975) 4228841..4229179 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PVA73_RS20985 (PVA73_20980) 4229145..4230080 - 936 WP_049783585.1 hypothetical protein VF
PVA73_RS20990 (PVA73_20985) 4230551..4230970 - 420 WP_000539682.1 hypothetical protein VF
PVA73_RS20995 (PVA73_20990) 4230973..4232217 - 1245 WP_001095932.1 hypothetical protein VF
PVA73_RS21000 (PVA73_20995) 4232382..4233332 - 951 Protein_4115 ISNCY family transposase ISPlu22 VF
PVA73_RS21005 (PVA73_21000) 4233398..4233934 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PVA73_RS21010 (PVA73_21005) 4233947..4234165 - 219 WP_000958171.1 hypothetical protein -
PVA73_RS21015 (PVA73_21010) 4234246..4234695 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PVA73_RS21020 (PVA73_21015) 4235363..4237357 - 1995 WP_001241572.1 DNA topoisomerase III -
PVA73_RS21025 (PVA73_21020) 4237468..4238244 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PVA73_RS21030 (PVA73_21025) 4238833..4240143 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PVA73_RS21035 (PVA73_21030) 4240173..4240421 - 249 WP_000377625.1 hypothetical protein -
PVA73_RS21040 (PVA73_21035) 4240421..4240978 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PVA73_RS21045 (PVA73_21040) 4241063..4241785 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PVA73_RS21050 (PVA73_21045) 4241772..4242032 - 261 WP_000838568.1 hypothetical protein -
PVA73_RS21055 (PVA73_21050) 4242246..4244045 - 1800 WP_001029724.1 ParB family protein -
PVA73_RS21060 (PVA73_21055) 4244038..4245402 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PVA73_RS21065 (PVA73_21060) 4245399..4246349 - 951 WP_000068773.1 hypothetical protein VF
PVA73_RS21070 (PVA73_21070) 4247101..4247178 + 78 Protein_4129 porin family protein -
PVA73_RS21075 (PVA73_21075) 4247278..4248030 + 753 WP_001785756.1 non-specific acid phosphatase -
PVA73_RS21080 (PVA73_21080) 4248271..4248762 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PVA73_RS21085 (PVA73_21085) 4248759..4249052 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PVA73_RS21090 (PVA73_21090) 4249369..4249591 + 223 Protein_4133 hypothetical protein -
PVA73_RS21095 (PVA73_21095) 4249857..4250732 + 876 WP_000921674.1 AraC family transcriptional regulator -
PVA73_RS21100 (PVA73_21100) 4250729..4251016 + 288 WP_001269916.1 transcriptional regulator RtsB -
PVA73_RS21105 (PVA73_21105) 4251039..4251255 + 217 Protein_4136 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance