NZ_CP1203934111220..4244136

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP120393        Location: 4111220..4244136         Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1698-2017_CO_06       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVA83_RS20245 (PVA83_20240) 4107019..4108320 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PVA83_RS20250 (PVA83_20245) 4108441..4108788 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PVA83_RS20255 (PVA83_20250) 4108764..4110467 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PVA83_RS20260 (PVA83_20255) 4110504..4111079 + 576 WP_001188506.1 transcriptional regulator -
PVA83_RS20270 (PVA83_20265) 4111430..4112689 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PVA83_RS20275 (PVA83_20270) 4113000..4114283 + 1284 WP_000975154.1 SH3 domain-containing protein -
PVA83_RS20280 (PVA83_20275) 4114368..4114637 + 270 Protein_3973 integrase -
PVA83_RS20285 (PVA83_20280) 4115264..4116046 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PVA83_RS20290 (PVA83_20285) 4116316..4116510 + 195 WP_162009227.1 hypothetical protein -
PVA83_RS20295 (PVA83_20290) 4116903..4117124 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PVA83_RS20300 (PVA83_20295) 4117121..4117582 - 462 WP_000246267.1 hypothetical protein -
PVA83_RS20305 (PVA83_20300) 4118129..4119802 + 1674 WP_010989301.1 hypothetical protein -
PVA83_RS20310 (PVA83_20305) 4119883..4122168 + 2286 WP_010989300.1 hypothetical protein -
PVA83_RS20315 (PVA83_20310) 4122472..4122723 + 252 WP_024131240.1 hypothetical protein -
PVA83_RS20320 (PVA83_20315) 4122805..4123257 + 453 WP_000434168.1 hypothetical protein -
PVA83_RS20325 (PVA83_20320) 4123437..4123925 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PVA83_RS20330 (PVA83_20325) 4123922..4124215 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PVA83_RS20335 (PVA83_20330) 4124642..4125655 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA83_RS20340 (PVA83_20335) 4125819..4127408 - 1590 WP_000488995.1 TraI domain-containing protein -
PVA83_RS20345 (PVA83_20340) 4127392..4128903 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PVA83_RS20350 (PVA83_20345) 4129757..4130296 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PVA83_RS20355 (PVA83_20350) 4130541..4131818 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PVA83_RS20360 (PVA83_20355) 4131821..4132867 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PVA83_RS20365 (PVA83_20360) 4132891..4135386 + 2496 WP_010989299.1 hypothetical protein VF
PVA83_RS20370 (PVA83_20365) 4135386..4137122 + 1737 WP_000632616.1 hypothetical protein VF
PVA83_RS20375 (PVA83_20370) 4137167..4138234 + 1068 WP_000720235.1 hypothetical protein VF
PVA83_RS20380 (PVA83_20375) 4138244..4139038 + 795 WP_001023498.1 hypothetical protein VF
PVA83_RS20385 (PVA83_20380) 4139064..4139759 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PVA83_RS20390 (PVA83_20385) 4139782..4141086 + 1305 WP_000431675.1 hypothetical protein VF
PVA83_RS20395 (PVA83_20390) 4141106..4143076 + 1971 WP_000052242.1 hypothetical protein VF
PVA83_RS20400 (PVA83_20395) 4143378..4144124 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PVA83_RS20405 (PVA83_20400) 4144124..4145014 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PVA83_RS20410 (PVA83_20405) 4145025..4145282 - 258 WP_001681810.1 YjhX family toxin -
PVA83_RS20415 (PVA83_20410) 4145584..4145694 - 111 Protein_4000 autoinducer 2 ABC transporter substrate-binding protein -
PVA83_RS20420 (PVA83_20415) 4145929..4146273 + 345 Protein_4001 translesion error-prone DNA polymerase V autoproteolytic subunit -
PVA83_RS20425 (PVA83_20420) 4146389..4147414 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA83_RS20430 (PVA83_20425) 4147418..4148050 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PVA83_RS20435 (PVA83_20430) 4148167..4148409 + 243 WP_000102106.1 Rha family transcriptional regulator -
PVA83_RS20440 (PVA83_20435) 4148442..4148951 + 510 WP_000460852.1 phage regulatory CII family protein -
PVA83_RS20445 (PVA83_20440) 4148959..4149159 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PVA83_RS20450 (PVA83_20445) 4149123..4149464 + 342 WP_000963479.1 DUF5347 family protein -
PVA83_RS20455 (PVA83_20450) 4149532..4149765 + 234 WP_001244240.1 DUF2732 family protein -
PVA83_RS20460 (PVA83_20455) 4149765..4149992 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PVA83_RS20465 (PVA83_20460) 4149989..4150573 + 585 WP_001090717.1 exonuclease domain-containing protein -
PVA83_RS20470 (PVA83_20465) 4150570..4151430 + 861 WP_000104130.1 DNA adenine methylase -
PVA83_RS20475 (PVA83_20470) 4151421..4153829 + 2409 WP_000301193.1 replication endonuclease -
PVA83_RS20480 (PVA83_20475) 4153997..4154185 + 189 WP_001154438.1 hypothetical protein -
PVA83_RS20485 (PVA83_20480) 4154197..4154430 + 234 WP_001217561.1 DinI family protein -
PVA83_RS20490 (PVA83_20485) 4154526..4154744 + 219 WP_000835188.1 hypothetical protein -
PVA83_RS20495 (PVA83_20490) 4154754..4155818 + 1065 WP_000829584.1 hypothetical protein -
PVA83_RS20500 (PVA83_20495) 4155815..4156879 + 1065 WP_000789323.1 hypothetical protein -
PVA83_RS20505 (PVA83_20500) 4156899..4157594 + 696 WP_000080839.1 hypothetical protein -
PVA83_RS20510 (PVA83_20505) 4157643..4158686 - 1044 WP_285238736.1 phage portal protein -
PVA83_RS20515 (PVA83_20510) 4158686..4160452 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PVA83_RS20520 (PVA83_20515) 4160595..4161428 + 834 WP_285238737.1 GPO family capsid scaffolding protein -
PVA83_RS20525 (PVA83_20520) 4161445..4162509 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PVA83_RS20530 (PVA83_20525) 4162513..4163163 + 651 WP_000059175.1 terminase endonuclease subunit -
PVA83_RS20535 (PVA83_20530) 4163257..4163721 + 465 WP_000673540.1 head completion/stabilization protein -
PVA83_RS20540 (PVA83_20535) 4163721..4163924 + 204 WP_000868184.1 tail protein X -
PVA83_RS20545 (PVA83_20540) 4163928..4164143 + 216 WP_000171566.1 HP1 family phage holin -
PVA83_RS20550 (PVA83_20545) 4164124..4164633 + 510 WP_001097942.1 lysozyme -
PVA83_RS20555 (PVA83_20550) 4164638..4165015 + 378 WP_000731034.1 DNZ54_00345 family protein -
PVA83_RS20560 (PVA83_20555) 4165012..4165440 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PVA83_RS20565 (PVA83_20560) 4165325..4165573 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PVA83_RS20570 (PVA83_20565) 4165536..4165967 + 432 WP_001039961.1 phage tail protein -
PVA83_RS20575 (PVA83_20570) 4165960..4166406 + 447 WP_000343944.1 phage virion morphogenesis protein -
PVA83_RS20580 (PVA83_20575) 4166475..4167053 + 579 WP_000993749.1 phage baseplate assembly protein V -
PVA83_RS20585 (PVA83_20580) 4167050..4167409 + 360 WP_000177408.1 GPW/gp25 family protein -
PVA83_RS20590 (PVA83_20585) 4167396..4168304 + 909 WP_000268327.1 baseplate assembly protein -
PVA83_RS20595 (PVA83_20590) 4168297..4168902 + 606 WP_001086816.1 phage tail protein I -
PVA83_RS20600 (PVA83_20595) 4168899..4170518 + 1620 WP_000104806.1 phage tail protein -
PVA83_RS20605 (PVA83_20600) 4170525..4170932 + 408 WP_000006337.1 tail fiber assembly protein -
PVA83_RS20610 (PVA83_20605) 4171130..4171852 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PVA83_RS20615 (PVA83_20610) 4172063..4172284 + 222 Protein_4040 helix-turn-helix domain-containing protein -
PVA83_RS20620 (PVA83_20615) 4172387..4173559 + 1173 WP_000046101.1 phage tail sheath protein -
PVA83_RS20625 (PVA83_20620) 4173569..4174084 + 516 WP_001207653.1 phage major tail tube protein -
PVA83_RS20630 (PVA83_20625) 4174139..4174441 + 303 WP_001280965.1 phage tail assembly protein -
PVA83_RS20635 (PVA83_20630) 4174456..4174575 + 120 WP_000763315.1 GpE family phage tail protein -
PVA83_RS20640 (PVA83_20635) 4174568..4177348 + 2781 WP_001282813.1 phage tail tape measure protein -
PVA83_RS20645 (PVA83_20640) 4177348..4177833 + 486 WP_000980405.1 phage tail protein -
PVA83_RS20650 (PVA83_20645) 4177830..4178930 + 1101 WP_001011750.1 phage late control D family protein -
PVA83_RS20655 (PVA83_20650) 4178998..4179216 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PVA83_RS20660 (PVA83_20655) 4179303..4179680 - 378 WP_001039750.1 hypothetical protein -
PVA83_RS20665 (PVA83_20660) 4179814..4179900 + 87 Protein_4050 peptidase -
PVA83_RS20670 (PVA83_20665) 4179900..4181174 + 1275 WP_000457555.1 Y-family DNA polymerase -
PVA83_RS20675 (PVA83_20670) 4181306..4181575 + 270 WP_001222413.1 hypothetical protein -
PVA83_RS20680 (PVA83_20675) 4181675..4182001 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PVA83_RS20685 (PVA83_20680) 4182076..4182975 - 900 WP_000022217.1 hypothetical protein -
PVA83_RS20690 (PVA83_20685) 4183049..4183957 - 909 WP_000881183.1 hypothetical protein -
PVA83_RS20695 (PVA83_20690) 4184029..4185978 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PVA83_RS20700 (PVA83_20695) 4186067..4186525 - 459 WP_000115421.1 hypothetical protein -
PVA83_RS20705 (PVA83_20700) 4186603..4186899 - 297 WP_000968700.1 hypothetical protein -
PVA83_RS20710 (PVA83_20705) 4186896..4187348 - 453 WP_000979718.1 hypothetical protein -
PVA83_RS20715 (PVA83_20710) 4187366..4187575 - 210 WP_000018145.1 hypothetical protein -
PVA83_RS20720 (PVA83_20715) 4187946..4188326 - 381 WP_001103837.1 hypothetical protein -
PVA83_RS20725 (PVA83_20720) 4188422..4188724 - 303 WP_001020123.1 hypothetical protein -
PVA83_RS20730 (PVA83_20725) 4189448..4190368 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PVA83_RS20735 (PVA83_20730) 4191634..4192176 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PVA83_RS20740 (PVA83_20735) 4192387..4193028 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PVA83_RS20745 (PVA83_20740) 4193013..4194260 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PVA83_RS20750 (PVA83_20745) 4194647..4194907 + 261 WP_227773069.1 hypothetical protein -
PVA83_RS20755 (PVA83_20750) 4195131..4195520 + 390 WP_000993574.1 hypothetical protein -
PVA83_RS20760 (PVA83_20755) 4195556..4197061 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PVA83_RS20765 (PVA83_20760) 4197394..4198791 - 1398 WP_014341560.1 integrating conjugative element protein -
PVA83_RS20770 (PVA83_20765) 4198839..4199807 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PVA83_RS20775 (PVA83_20770) 4199804..4200196 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PVA83_RS20780 (PVA83_20775) 4200351..4200737 - 387 WP_000054770.1 hypothetical protein -
PVA83_RS20785 (PVA83_20780) 4200892..4203608 - 2717 Protein_4074 conjugative transfer ATPase -
PVA83_RS20790 (PVA83_20785) 4203728..4204177 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PVA83_RS20795 (PVA83_20790) 4204164..4205642 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PVA83_RS20800 (PVA83_20795) 4205632..4206531 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PVA83_RS20805 (PVA83_20800) 4206531..4207184 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PVA83_RS20810 (PVA83_20805) 4207181..4207555 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PVA83_RS20815 (PVA83_20810) 4207565..4207930 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PVA83_RS20820 (PVA83_20815) 4207957..4208190 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PVA83_RS20825 (PVA83_20820) 4208196..4208450 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PVA83_RS20830 (PVA83_20825) 4208687..4209445 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PVA83_RS20835 (PVA83_20830) 4209442..4211532 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PVA83_RS20840 (PVA83_20835) 4211552..4212121 - 570 WP_000626967.1 restriction endonuclease -
PVA83_RS20845 (PVA83_20840) 4212131..4212631 - 501 WP_000253629.1 integrating conjugative element protein -
PVA83_RS20850 (PVA83_20845) 4212667..4213353 - 687 WP_000013624.1 hypothetical protein VF
PVA83_RS20855 (PVA83_20850) 4213332..4214018 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PVA83_RS20860 (PVA83_20855) 4214091..4215005 - 915 WP_000214158.1 hypothetical protein -
PVA83_RS20865 (PVA83_20860) 4214962..4215324 - 363 WP_001149494.1 hypothetical protein -
PVA83_RS20870 (PVA83_20865) 4215512..4216387 - 876 WP_000994659.1 hypothetical protein -
PVA83_RS20875 (PVA83_20870) 4216599..4217066 - 468 WP_000455463.1 hypothetical protein -
PVA83_RS20880 (PVA83_20875) 4217163..4218314 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA83_RS20885 (PVA83_20880) 4218665..4219969 - 1305 WP_000744277.1 hypothetical protein VF
PVA83_RS20890 (PVA83_20885) 4219966..4220628 - 663 WP_000218700.1 hypothetical protein VF
PVA83_RS20895 (PVA83_20890) 4220625..4221068 - 444 WP_223228896.1 hypothetical protein VF
PVA83_RS20900 (PVA83_20895) 4221111..4221707 - 597 WP_024131234.1 hypothetical protein VF
PVA83_RS20905 (PVA83_20900) 4221746..4222831 - 1086 WP_000074784.1 hypothetical protein VF
PVA83_RS20910 (PVA83_20905) 4222828..4224543 - 1716 WP_001289222.1 hypothetical protein VF
PVA83_RS20915 (PVA83_20910) 4224553..4224933 - 381 WP_014341558.1 hypothetical protein VF
PVA83_RS20920 (PVA83_20915) 4225121..4226407 - 1287 WP_000763621.1 hypothetical protein VF
PVA83_RS20925 (PVA83_20920) 4226409..4226747 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PVA83_RS20930 (PVA83_20925) 4226713..4227597 - 885 WP_234828522.1 hypothetical protein VF
PVA83_RS20935 (PVA83_20930) 4228119..4228538 - 420 WP_000539682.1 hypothetical protein VF
PVA83_RS20940 (PVA83_20935) 4228541..4229785 - 1245 WP_001095932.1 hypothetical protein VF
PVA83_RS20945 (PVA83_20940) 4229950..4230900 - 951 Protein_4106 ISNCY family transposase ISPlu22 VF
PVA83_RS20950 (PVA83_20945) 4230966..4231502 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PVA83_RS20955 (PVA83_20950) 4231515..4231733 - 219 WP_000958171.1 hypothetical protein -
PVA83_RS20960 (PVA83_20955) 4231814..4232263 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PVA83_RS20965 (PVA83_20960) 4232931..4234925 - 1995 WP_001241572.1 DNA topoisomerase III -
PVA83_RS20970 (PVA83_20965) 4235036..4235812 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PVA83_RS20975 (PVA83_20970) 4236401..4237711 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PVA83_RS20980 (PVA83_20975) 4237741..4237989 - 249 WP_000377625.1 hypothetical protein -
PVA83_RS20985 (PVA83_20980) 4237989..4238546 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PVA83_RS20990 (PVA83_20985) 4238631..4239353 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PVA83_RS20995 (PVA83_20990) 4239340..4239600 - 261 WP_000838568.1 hypothetical protein -
PVA83_RS21000 (PVA83_20995) 4239814..4241613 - 1800 WP_001029724.1 ParB family protein -
PVA83_RS21005 (PVA83_21000) 4241606..4242970 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PVA83_RS21010 (PVA83_21005) 4242967..4244001 - 1035 WP_001195363.1 hypothetical protein VF
PVA83_RS21015 (PVA83_21015) 4244669..4244746 + 78 Protein_4120 porin family protein -
PVA83_RS21020 (PVA83_21020) 4244846..4245598 + 753 WP_001785756.1 non-specific acid phosphatase -
PVA83_RS21025 (PVA83_21025) 4245839..4246330 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PVA83_RS21030 (PVA83_21030) 4246327..4246620 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PVA83_RS21035 (PVA83_21035) 4246937..4247159 + 223 Protein_4124 hypothetical protein -
PVA83_RS21040 (PVA83_21040) 4247425..4248300 + 876 WP_000921674.1 AraC family transcriptional regulator -
PVA83_RS21045 (PVA83_21045) 4248297..4248584 + 288 WP_001269916.1 transcriptional regulator RtsB -
PVA83_RS21050 (PVA83_21050) 4248607..4248823 + 217 Protein_4127 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance