MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 71281 bp
Accession: NZ_CP120359 Location: 2443236..2514516 Organism: Pseudomonas sp. AA-38 Replicon: chromosome
Accession: NZ_CP120359 Location: 2443236..2514516 Organism: Pseudomonas sp. AA-38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVE35_RS11065 | 2438653..2439321 | - | 669 | WP_277374648.1 | Bax inhibitor-1/YccA family protein | - |
| PVE35_RS11075 | 2439742..2440386 | + | 645 | WP_268184085.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PVE35_RS11080 | 2440389..2442212 | + | 1824 | WP_277374649.1 | excinuclease ABC subunit UvrC | - |
| PVE35_RS11085 | 2442246..2442806 | + | 561 | WP_268184091.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PVE35_RS11105 | 2443339..2444367 | - | 1029 | WP_277374650.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PVE35_RS11110 | 2444368..2444580 | - | 213 | WP_277374651.1 | DUF4224 domain-containing protein | - |
| PVE35_RS11115 | 2444884..2445159 | + | 276 | WP_277374652.1 | hypothetical protein | - |
| PVE35_RS11120 | 2445285..2446106 | + | 822 | WP_277374653.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| PVE35_RS11125 | 2446090..2447025 | + | 936 | WP_277374654.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| PVE35_RS11130 | 2447142..2447315 | - | 174 | WP_157782029.1 | hypothetical protein | - |
| PVE35_RS11135 | 2447360..2447647 | - | 288 | WP_090337702.1 | HigA family addiction module antitoxin | - |
| PVE35_RS11140 | 2447665..2447942 | - | 278 | Protein_2190 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PVE35_RS11145 | 2448036..2448269 | - | 234 | WP_277374655.1 | DUF2274 domain-containing protein | - |
| PVE35_RS11150 | 2448266..2449531 | - | 1266 | WP_277374656.1 | TrbI/VirB10 family protein | - |
| PVE35_RS11155 | 2449534..2450520 | - | 987 | WP_277374657.1 | P-type conjugative transfer protein TrbG | - |
| PVE35_RS11160 | 2450517..2451223 | - | 707 | Protein_2194 | conjugal transfer protein TrbF | - |
| PVE35_RS11165 | 2451236..2452396 | - | 1161 | WP_277374658.1 | P-type conjugative transfer protein TrbL | - |
| PVE35_RS11170 | 2452393..2452578 | - | 186 | WP_277374659.1 | hypothetical protein | - |
| PVE35_RS11175 | 2452591..2453325 | - | 735 | WP_277374660.1 | P-type conjugative transfer protein TrbJ | - |
| PVE35_RS11180 | 2453322..2455757 | - | 2436 | WP_277374661.1 | conjugal transfer protein TrbE | - |
| PVE35_RS11185 | 2455768..2456040 | - | 273 | WP_277374662.1 | VirB3 family type IV secretion system protein | - |
| PVE35_RS11190 | 2456037..2456378 | - | 342 | WP_277374663.1 | TrbC/VirB2 family protein | - |
| PVE35_RS11195 | 2456350..2457318 | - | 969 | WP_277374877.1 | hypothetical protein | VF |
| PVE35_RS11200 | 2457378..2457812 | - | 435 | WP_014596911.1 | CopG family transcriptional regulator | - |
| PVE35_RS11205 | 2457809..2459800 | - | 1992 | WP_277374664.1 | Conjugal transfer protein TraG | VF |
| PVE35_RS11210 | 2460331..2461818 | + | 1488 | WP_277374665.1 | SulP family inorganic anion transporter | - |
| PVE35_RS11215 | 2461833..2462684 | + | 852 | WP_277374666.1 | universal stress protein | - |
| PVE35_RS11220 | 2463097..2463405 | - | 309 | WP_196622128.1 | transcriptional regulator | Antitoxin Detail |
| PVE35_RS11225 | 2463402..2463746 | - | 345 | WP_196622127.1 | toxin | Toxin Detail |
| PVE35_RS11230 | 2463904..2464830 | - | 927 | WP_277372376.1 | Hca operon transcriptional activator HcaR | VF |
| PVE35_RS11235 | 2464844..2466043 | - | 1200 | WP_122109873.1 | MFS transporter | - |
| PVE35_RS11240 | 2466129..2467982 | - | 1854 | WP_277374667.1 | Asparagine synthetase [glutamine-hydrolyzing] 3 | VF |
| PVE35_RS11245 | 2468005..2469075 | - | 1071 | WP_277374668.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PVE35_RS11250 | 2469072..2469575 | - | 504 | WP_277374669.1 | GNAT family N-acetyltransferase | - |
| PVE35_RS11255 | 2469577..2470809 | - | 1233 | WP_277374670.1 | 5-aminolevulinate synthase | - |
| PVE35_RS11260 | 2470966..2471819 | + | 854 | Protein_2214 | helix-turn-helix transcriptional regulator | - |
| PVE35_RS11265 | 2471837..2473786 | - | 1950 | WP_277374671.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| PVE35_RS11270 | 2474136..2474663 | - | 528 | WP_277374672.1 | S26 family signal peptidase | - |
| PVE35_RS11275 | 2474660..2474902 | - | 243 | WP_277374673.1 | hypothetical protein | - |
| PVE35_RS11280 | 2474899..2475537 | - | 639 | WP_277374674.1 | Chromosome-partitioning ATPase Soj | VF |
| PVE35_RS11285 | 2475782..2476609 | - | 828 | WP_277374675.1 | replication initiator protein A | - |
| PVE35_RS11290 | 2476621..2476902 | - | 282 | WP_218575876.1 | helix-turn-helix domain-containing protein | - |
| PVE35_RS11295 | 2477497..2478009 | - | 513 | WP_277374676.1 | antirestriction protein ArdA | - |
| PVE35_RS11300 | 2478294..2478593 | - | 300 | WP_277374677.1 | GNAT family N-acetyltransferase | - |
| PVE35_RS11305 | 2479169..2479516 | - | 348 | WP_277374678.1 | LasR-specific antiactivator QslA | - |
| PVE35_RS11310 | 2479513..2479782 | - | 270 | WP_277374680.1 | hypothetical protein | - |
| PVE35_RS11315 | 2480438..2481166 | + | 729 | WP_277374681.1 | Crp/Fnr family transcriptional regulator | - |
| PVE35_RS11320 | 2481286..2482002 | + | 717 | WP_017677000.1 | Crp/Fnr family transcriptional regulator | - |
| PVE35_RS11325 | 2482024..2483250 | - | 1227 | WP_277374682.1 | GGDEF domain-containing protein | - |
| PVE35_RS11330 | 2483296..2484087 | - | 792 | WP_277374683.1 | Peptidoglycan-associated lipoprotein | VF |
| PVE35_RS11335 | 2484084..2484479 | - | 396 | WP_277374684.1 | DUF4398 domain-containing protein | - |
| PVE35_RS11340 | 2484543..2484752 | - | 210 | WP_277374685.1 | hypothetical protein | - |
| PVE35_RS11345 | 2484961..2485341 | + | 381 | WP_013715907.1 | DUF883 family protein | - |
| PVE35_RS11350 | 2485365..2485787 | + | 423 | WP_277374686.1 | phage holin family protein | - |
| PVE35_RS11355 | 2485784..2486089 | + | 306 | WP_017676995.1 | hypothetical protein | - |
| PVE35_RS11360 | 2486190..2486399 | + | 210 | WP_179576556.1 | hypothetical protein | - |
| PVE35_RS11365 | 2486436..2487137 | - | 702 | WP_277374687.1 | alpha/beta fold hydrolase | - |
| PVE35_RS11370 | 2487361..2487903 | + | 543 | WP_277374688.1 | hypothetical protein | - |
| PVE35_RS11375 | 2488029..2488862 | - | 834 | WP_277374689.1 | BON domain-containing protein | - |
| PVE35_RS11380 | 2489036..2489194 | - | 159 | WP_017676990.1 | DUF3309 family protein | - |
| PVE35_RS11385 | 2489430..2489642 | - | 213 | WP_013715900.1 | CsbD family protein | - |
| PVE35_RS11390 | 2489639..2489887 | - | 249 | WP_196475022.1 | hypothetical protein | - |
| PVE35_RS11395 | 2489995..2490726 | - | 732 | WP_017676988.1 | serine protease | - |
| PVE35_RS11400 | 2491834..2492049 | - | 216 | WP_277374690.1 | general stress protein CsbD | - |
| PVE35_RS11405 | 2492055..2500676 | - | 8622 | WP_277374691.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| PVE35_RS11410 | 2500968..2501690 | + | 723 | WP_277374692.1 | Crp/Fnr family transcriptional regulator | - |
| PVE35_RS11415 | 2501710..2501901 | + | 192 | Protein_2245 | IS3 family transposase | - |
| PVE35_RS11420 | 2501907..2502137 | - | 231 | Protein_2246 | DNA repair protein RadC | - |
| PVE35_RS11425 | 2502629..2502976 | - | 348 | WP_277374693.1 | LasR-specific antiactivator QslA | - |
| PVE35_RS11430 | 2502973..2503242 | - | 270 | WP_010791781.1 | hypothetical protein | - |
| PVE35_RS11435 | 2503889..2506984 | + | 3096 | WP_277374694.1 | DEAD/DEAH box helicase family protein | - |
| PVE35_RS11440 | 2506981..2509719 | + | 2739 | WP_277374695.1 | site-specific DNA-methyltransferase | - |
| PVE35_RS11445 | 2509767..2511836 | + | 2070 | WP_277374696.1 | 3'-5' exonuclease | - |
| PVE35_RS11450 | 2512148..2513083 | - | 936 | WP_277374697.1 | hypothetical protein | - |
| PVE35_RS11455 | 2513587..2513955 | - | 369 | WP_277374698.1 | rhodanese-like domain-containing protein | - |
| PVE35_RS11460 | 2513965..2514234 | - | 270 | Protein_2254 | TauD/TfdA family dioxygenase | - |
| PVE35_RS11470 | 2514644..2516440 | - | 1797 | WP_277374699.1 | thiamine pyrophosphate-requiring protein | - |
| PVE35_RS11475 | 2516694..2518301 | - | 1608 | WP_277374700.1 | methyl-accepting chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|