MGE detailed information
MGE type: Genomic_island MGE length: 77276 bp
Accession: NZ_CP119746 Location: 4421575..4498850 Organism: Escherichia coli strain E15 Replicon: chromosome
Accession: NZ_CP119746 Location: 4421575..4498850 Organism: Escherichia coli strain E15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J19_RS21455 (4416946) | 4416946..4418130 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| P1J19_RS21460 (4418280) | 4418280..4419290 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| P1J19_RS21465 (4419386) | 4419386..4421512 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| P1J19_RS21470 (4421575) | 4421575..4422852 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| P1J19_RS21475 (4422852) | 4422852..4424282 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| P1J19_RS21480 (4424477) | 4424477..4425871 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| P1J19_RS21485 (4426449) | 4426449..4426736 | - | 288 | Protein_4203 | integrase core domain-containing protein | - |
| P1J19_RS21490 (4426725) | 4426725..4427086 | - | 362 | Protein_4204 | IS1 family transposase IS1A | Transposase |
| P1J19_RS21495 (4427136) | 4427136..4428170 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| P1J19_RS21500 (4428314) | 4428314..4429987 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| P1J19_RS21505 (4430040) | 4430040..4430237 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| P1J19_RS21510 (4430377) | 4430377..4430643 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| P1J19_RS21515 (4430640) | 4430640..4432211 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| P1J19_RS21520 (4432258) | 4432258..4433337 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| P1J19_RS21525 (4433386) | 4433386..4434282 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| P1J19_RS21530 (4434702) | 4434702..4435439 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| P1J19_RS21535 (4435669) | 4435669..4435847 | + | 179 | Protein_4213 | integrase | - |
| P1J19_RS21540 (4436070) | 4436070..4436966 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| P1J19_RS21545 (4436966) | 4436966..4438588 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| P1J19_RS21550 (4438597) | 4438597..4439739 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| P1J19_RS21555 (4439736) | 4439736..4441370 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| P1J19_RS21560 (4441434) | 4441434..4444847 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| P1J19_RS21565 (4445455) | 4445455..4445969 | + | 515 | Protein_4219 | ISL3 family transposase ISEc38 | Transposase |
| P1J19_RS21570 (4446269) | 4446269..4446535 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| P1J19_RS21575 (4447002) | 4447002..4448084 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| P1J19_RS21580 (4448087) | 4448087..4449031 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| P1J19_RS21585 (4449028) | 4449028..4450008 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| P1J19_RS21590 (4450176) | 4450176..4451337 | + | 1162 | Protein_4224 | IS3 family transposase IS3 | Transposase |
| P1J19_RS21595 (4451488) | 4451488..4452720 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| P1J19_RS21600 (4453171) | 4453171..4453434 | - | 264 | Protein_4226 | hypothetical protein | VF |
| P1J19_RS21605 (4453641) | 4453641..4453955 | - | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P1J19_RS21610 (4454378) | 4454378..4454656 | + | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| P1J19_RS21615 (4454590) | 4454590..4455246 | + | 657 | Protein_4229 | IS91-like element ISVsa3 family transposase | - |
| P1J19_RS21620 (4455277) | 4455277..4456161 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| P1J19_RS21625 (4456378) | 4456378..4457592 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| P1J19_RS21630 (4457620) | 4457620..4457925 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| P1J19_RS21635 (4458037) | 4458037..4458225 | + | 189 | Protein_4233 | IS91 family transposase | - |
| P1J19_RS21640 (4458192) | 4458192..4459391 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| P1J19_RS21645 (4459497) | 4459497..4460147 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| P1J19_RS21650 (4460179) | 4460179..4460421 | - | 243 | WP_000844627.1 | transposase | - |
| P1J19_RS21655 (4460727) | 4460727..4461563 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| P1J19_RS21660 (4461563) | 4461563..4462366 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J19_RS21665 (4462427) | 4462427..4463242 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| P1J19_RS21670 (4463483) | 4463483..4464055 | - | 573 | WP_247172500.1 | Tat pathway signal sequence protein | - |
| P1J19_RS21675 (4464918) | 4464918..4465093 | - | 176 | Protein_4241 | transposase | - |
| P1J19_RS21680 (4465282) | 4465282..4465458 | - | 177 | Protein_4242 | transketolase family protein | - |
| P1J19_RS21685 (4465518) | 4465518..4466209 | + | 692 | Protein_4243 | IS1 family transposase | - |
| P1J19_RS21690 (4466612) | 4466612..4466803 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| P1J19_RS21695 (4466872) | 4466872..4467120 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| P1J19_RS21700 (4467139) | 4467139..4467687 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| P1J19_RS21705 (4467956) | 4467956..4468192 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| P1J19_RS21710 (4468261) | 4468261..4468833 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| P1J19_RS21715 (4468848) | 4468848..4468997 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| P1J19_RS21720 (4469117) | 4469117..4469683 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| P1J19_RS21725 (4471280) | 4471280..4472884 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| P1J19_RS21730 (4473318) | 4473318..4473524 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| P1J19_RS21735 (4473536) | 4473536..4473796 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| P1J19_RS21740 (4473820) | 4473820..4473975 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| P1J19_RS21745 (4474069) | 4474069..4474800 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| P1J19_RS21750 (4476551) | 4476551..4477360 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| P1J19_RS21755 (4477357) | 4477357..4478289 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| P1J19_RS21760 (4478396) | 4478396..4479280 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| P1J19_RS21765 (4479399) | 4479399..4480076 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| P1J19_RS21770 (4480106) | 4480106..4480315 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| P1J19_RS21775 (4480406) | 4480406..4481224 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| P1J19_RS21780 (4481316) | 4481316..4481801 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| P1J19_RS21785 (4481817) | 4481817..4482293 | + | 477 | WP_001186715.1 | RadC family protein | - |
| P1J19_RS21790 (4482362) | 4482362..4482583 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| P1J19_RS21795 (4482663) | 4482663..4483037 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| P1J19_RS21800 (4483084) | 4483084..4483353 | + | 270 | Protein_4266 | TA system toxin CbtA family protein | - |
| P1J19_RS21805 (4483355) | 4483355..4483576 | + | 222 | Protein_4267 | cupin fold metalloprotein, WbuC family | - |
| P1J19_RS21810 (4483623) | 4483623..4484498 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| P1J19_RS21815 (4484751) | 4484751..4486013 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| P1J19_RS21820 (4486186) | 4486186..4486311 | + | 126 | Protein_4270 | TA system toxin CbtA family protein | - |
| P1J19_RS21825 (4486308) | 4486308..4486799 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| P1J19_RS21830 (4486811) | 4486811..4487008 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| P1J19_RS21835 (4487093) | 4487093..4487959 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| P1J19_RS21840 (4488031) | 4488031..4488294 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| P1J19_RS21845 (4488291) | 4488291..4488617 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J19_RS21850 (4489500) | 4489500..4491037 | + | 1538 | Protein_4276 | lysine decarboxylation/transport transcriptional activator CadC | - |
| P1J19_RS21855 (4491403) | 4491403..4492737 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| P1J19_RS21860 (4492817) | 4492817..4494964 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| P1J19_RS21865 (4495023) | 4495023..4496480 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| P1J19_RS21870 (4496717) | 4496717..4498234 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| P1J19_RS21875 (4498353) | 4498353..4498526 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| P1J19_RS21880 (4498554) | 4498554..4498850 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| P1J19_RS21885 (4499077) | 4499077..4499349 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| P1J19_RS21890 (4499361) | 4499361..4499591 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| P1J19_RS21895 (4499772) | 4499772..4501403 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| P1J19_RS21900 (4501400) | 4501400..4502119 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|