MGE detailed information
MGE type: Genomic_island MGE length: 77276 bp
Accession: NZ_CP119726 Location: 4432046..4509321 Organism: Escherichia coli strain E16 Replicon: chromosome
Accession: NZ_CP119726 Location: 4432046..4509321 Organism: Escherichia coli strain E16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J20_RS21525 (4427417) | 4427417..4428601 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| P1J20_RS21530 (4428751) | 4428751..4429761 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| P1J20_RS21535 (4429857) | 4429857..4431983 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| P1J20_RS21540 (4432046) | 4432046..4433323 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| P1J20_RS21545 (4433323) | 4433323..4434753 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| P1J20_RS21550 (4434948) | 4434948..4436342 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| P1J20_RS21555 (4436920) | 4436920..4437207 | - | 288 | Protein_4217 | integrase core domain-containing protein | - |
| P1J20_RS21560 (4437196) | 4437196..4437557 | - | 362 | Protein_4218 | IS1 family transposase IS1A | Transposase |
| P1J20_RS21565 (4437607) | 4437607..4438641 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| P1J20_RS21570 (4438785) | 4438785..4440458 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| P1J20_RS21575 (4440511) | 4440511..4440708 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| P1J20_RS21580 (4440848) | 4440848..4441114 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| P1J20_RS21585 (4441111) | 4441111..4442682 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| P1J20_RS21590 (4442729) | 4442729..4443808 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| P1J20_RS21595 (4443857) | 4443857..4444753 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| P1J20_RS21600 (4445173) | 4445173..4445910 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| P1J20_RS21605 (4446140) | 4446140..4446318 | + | 179 | Protein_4227 | integrase | - |
| P1J20_RS21610 (4446541) | 4446541..4447437 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| P1J20_RS21615 (4447437) | 4447437..4449059 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| P1J20_RS21620 (4449068) | 4449068..4450210 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| P1J20_RS21625 (4450207) | 4450207..4451841 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| P1J20_RS21630 (4451905) | 4451905..4455318 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| P1J20_RS21635 (4455926) | 4455926..4456440 | + | 515 | Protein_4233 | ISL3 family transposase ISEc38 | Transposase |
| P1J20_RS21640 (4456740) | 4456740..4457006 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| P1J20_RS21645 (4457473) | 4457473..4458555 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| P1J20_RS21650 (4458558) | 4458558..4459502 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| P1J20_RS21655 (4459499) | 4459499..4460479 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| P1J20_RS21660 (4460647) | 4460647..4461808 | + | 1162 | Protein_4238 | IS3 family transposase IS3 | Transposase |
| P1J20_RS21665 (4461959) | 4461959..4463191 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| P1J20_RS21670 (4463642) | 4463642..4463905 | - | 264 | Protein_4240 | hypothetical protein | VF |
| P1J20_RS21675 (4464112) | 4464112..4464426 | - | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P1J20_RS21680 (4464849) | 4464849..4465127 | + | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| P1J20_RS21685 (4465061) | 4465061..4465717 | + | 657 | Protein_4243 | IS91-like element ISVsa3 family transposase | - |
| P1J20_RS21690 (4465748) | 4465748..4466632 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| P1J20_RS21695 (4466849) | 4466849..4468063 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| P1J20_RS21700 (4468091) | 4468091..4468396 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| P1J20_RS21705 (4468508) | 4468508..4468696 | + | 189 | Protein_4247 | IS91 family transposase | - |
| P1J20_RS21710 (4468663) | 4468663..4469862 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| P1J20_RS21715 (4469968) | 4469968..4470618 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| P1J20_RS21720 (4470650) | 4470650..4470892 | - | 243 | WP_000844627.1 | transposase | - |
| P1J20_RS21725 (4471198) | 4471198..4472034 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| P1J20_RS21730 (4472034) | 4472034..4472837 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1J20_RS21735 (4472898) | 4472898..4473713 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| P1J20_RS21740 (4473954) | 4473954..4474526 | - | 573 | WP_247172500.1 | Tat pathway signal sequence protein | - |
| P1J20_RS21745 (4475389) | 4475389..4475564 | - | 176 | Protein_4255 | transposase | - |
| P1J20_RS21750 (4475753) | 4475753..4475929 | - | 177 | Protein_4256 | transketolase family protein | - |
| P1J20_RS21755 (4475989) | 4475989..4476680 | + | 692 | Protein_4257 | IS1 family transposase | - |
| P1J20_RS21760 (4477083) | 4477083..4477274 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| P1J20_RS21765 (4477343) | 4477343..4477591 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| P1J20_RS21770 (4477610) | 4477610..4478158 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| P1J20_RS21775 (4478427) | 4478427..4478663 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| P1J20_RS21780 (4478732) | 4478732..4479304 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| P1J20_RS21785 (4479319) | 4479319..4479468 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| P1J20_RS21790 (4479588) | 4479588..4480154 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| P1J20_RS21795 (4481751) | 4481751..4483355 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| P1J20_RS21800 (4483789) | 4483789..4483995 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| P1J20_RS21805 (4484007) | 4484007..4484267 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| P1J20_RS21810 (4484291) | 4484291..4484446 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| P1J20_RS21815 (4484540) | 4484540..4485271 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| P1J20_RS21820 (4487022) | 4487022..4487831 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| P1J20_RS21825 (4487828) | 4487828..4488760 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| P1J20_RS21830 (4488867) | 4488867..4489751 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| P1J20_RS21835 (4489870) | 4489870..4490547 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| P1J20_RS21840 (4490577) | 4490577..4490786 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| P1J20_RS21845 (4490877) | 4490877..4491695 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| P1J20_RS21850 (4491787) | 4491787..4492272 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| P1J20_RS21855 (4492288) | 4492288..4492764 | + | 477 | WP_001186715.1 | RadC family protein | - |
| P1J20_RS21860 (4492833) | 4492833..4493054 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| P1J20_RS21865 (4493134) | 4493134..4493508 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| P1J20_RS21870 (4493555) | 4493555..4493824 | + | 270 | Protein_4280 | TA system toxin CbtA family protein | - |
| P1J20_RS21875 (4493826) | 4493826..4494047 | + | 222 | Protein_4281 | cupin fold metalloprotein, WbuC family | - |
| P1J20_RS21880 (4494094) | 4494094..4494969 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| P1J20_RS21885 (4495222) | 4495222..4496484 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| P1J20_RS21890 (4496657) | 4496657..4496782 | + | 126 | Protein_4284 | TA system toxin CbtA family protein | - |
| P1J20_RS21895 (4496779) | 4496779..4497270 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| P1J20_RS21900 (4497282) | 4497282..4497479 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| P1J20_RS21905 (4497564) | 4497564..4498430 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| P1J20_RS21910 (4498502) | 4498502..4498765 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| P1J20_RS21915 (4498762) | 4498762..4499088 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J20_RS21920 (4499971) | 4499971..4501508 | + | 1538 | Protein_4290 | lysine decarboxylation/transport transcriptional activator CadC | - |
| P1J20_RS21925 (4501874) | 4501874..4503208 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| P1J20_RS21930 (4503288) | 4503288..4505435 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| P1J20_RS21935 (4505494) | 4505494..4506951 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| P1J20_RS21940 (4507188) | 4507188..4508705 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| P1J20_RS21945 (4508824) | 4508824..4508997 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| P1J20_RS21950 (4509025) | 4509025..4509321 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| P1J20_RS21955 (4509548) | 4509548..4509820 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| P1J20_RS21960 (4509832) | 4509832..4510062 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| P1J20_RS21965 (4510243) | 4510243..4511874 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| P1J20_RS21970 (4511871) | 4511871..4512590 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|