MGE detailed information
MGE type: Genomic_island MGE length: 23586 bp
Accession: NZ_CP119120 Location: 2321479..2345064 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Accession: NZ_CP119120 Location: 2321479..2345064 Organism: Escherichia coli strain GENOMIC22-004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYZ88_RS11315 (2318481) | 2318481..2320166 | - | 1686 | WP_000628542.1 | ABC transporter ATP-binding protein/permease | - |
| PYZ88_RS11320 (2320369) | 2320369..2320491 | + | 123 | WP_122633168.1 | hypothetical protein | - |
| PYZ88_RS11325 (2320457) | 2320457..2321467 | - | 1011 | Protein_2196 | anaerobic sulfatase maturase | - |
| PYZ88_RS11335 (2322798) | 2322798..2322950 | - | 153 | Protein_2198 | anaerobic sulfatase maturase | - |
| PYZ88_RS11340 (2323002) | 2323002..2324684 | - | 1683 | WP_001295684.1 | sulfatase | - |
| PYZ88_RS11345 (2325086) | 2325086..2325847 | - | 762 | WP_000060479.1 | acid stress response transcriptional regulator YdeO | - |
| PYZ88_RS11350 (2325922) | 2325922..2326119 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| PYZ88_RS11355 (2326367) | 2326367..2328646 | - | 2280 | WP_000726689.1 | acid resistance putative oxidoreductase YdeP | - |
| PYZ88_RS11360 (2328980) | 2328980..2329894 | - | 915 | WP_000520679.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| PYZ88_RS11365 (2329954) | 2329954..2330457 | - | 504 | WP_000825458.1 | Protein FimG | VF |
| PYZ88_RS11370 (2330470) | 2330470..2331000 | - | 531 | WP_000876784.1 | Protein FimF | VF |
| PYZ88_RS11375 (2331014) | 2331014..2333665 | - | 2652 | WP_000125354.1 | Outer membrane usher protein FimD | VF |
| PYZ88_RS11380 (2333707) | 2333707..2334294 | - | 588 | Protein_2207 | Chaperone protein FocC | VF |
| PYZ88_RS11390 (2335057) | 2335057..2335194 | - | 138 | Protein_2209 | hypothetical protein | VF |
| PYZ88_RS11395 (2335555) | 2335555..2336118 | - | 564 | WP_001373493.1 | Type-1 fimbrial protein, A chain | VF |
| PYZ88_RS11400 (2336550) | 2336550..2336758 | - | 209 | Protein_2211 | AraC family transcriptional regulator | - |
| PYZ88_RS11405 (2337070) | 2337070..2338392 | - | 1323 | WP_001125463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| PYZ88_RS11410 (2338392) | 2338392..2338658 | - | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| PYZ88_RS11415 (2338867) | 2338867..2343573 | - | 4707 | Protein_2214 | hypothetical protein | VF |
| PYZ88_RS11420 (2343630) | 2343630..2344327 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| PYZ88_RS11425 (2344339) | 2344339..2345064 | - | 726 | Protein_2216 | ESPR-type extended signal peptide-containing protein | - |
| PYZ88_RS11430 (2345595) | 2345595..2347187 | - | 1593 | WP_000113125.1 | autoinducer-2 kinase | - |
| PYZ88_RS11435 (2347266) | 2347266..2348219 | - | 954 | WP_000154340.1 | transcriptional regulator LsrR | - |
| PYZ88_RS11440 (2348468) | 2348468..2350003 | + | 1536 | WP_001194882.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|