NZ_CP1186731..146450

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 146450 bp
Accession: NZ_CP118673        Location: 1..146450         Organism: Komagataeibacter nataicola strain DS12       Replicon: plasmid pKNA08


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LV564_RS00210 (LV564_00210) 30..1601 - 1572 Protein_0 IS66 family transposase IS66 Transposase
LV564_RS00215 (LV564_00215) 1667..2014 - 348 WP_019092242.1 IS66 family transposase ISAzs20 Transposase
LV564_RS00220 (LV564_00220) 2011..2499 - 489 WP_061276868.1 IS66 family transposase ISAzca2 Transposase
LV564_RS00225 (LV564_00225) 2503..2757 - 255 WP_275881139.1 hypothetical protein -
LV564_RS00230 (LV564_00230) 2741..2965 + 225 Protein_4 molybdopterin-dependent oxidoreductase -
LV564_RS00235 (LV564_00235) 3534..7196 - 3663 WP_194265671.1 ATP-dependent RecD-like DNA helicase Relaxase
LV564_RS00240 (LV564_00240) 7196..7516 - 321 WP_035367557.1 hypothetical protein -
LV564_RS00245 (LV564_00245) 8430..9329 + 900 WP_035367553.1 hypothetical protein -
LV564_RS00250 (LV564_00250) 9317..9976 + 660 WP_007284571.1 hypothetical protein -
LV564_RS00255 (LV564_00255) 10021..10248 + 228 WP_075595257.1 hypothetical protein -
LV564_RS00260 (LV564_00260) 10213..10785 - 573 WP_228120922.1 DUF2726 domain-containing protein -
LV564_RS00265 (LV564_00265) 10829..11896 - 1068 WP_035367551.1 Fic family protein -
LV564_RS00270 (LV564_00270) 11909..12118 - 210 WP_035367548.1 antitoxin VbhA family protein -
LV564_RS00275 (LV564_00275) 12326..12745 - 420 WP_035367547.1 single-stranded DNA-binding protein -
LV564_RS00280 (LV564_00280) 12758..12967 - 210 WP_007284577.1 hypothetical protein -
LV564_RS00285 (LV564_00285) 13630..14055 - 426 WP_035367714.1 hypothetical protein -
LV564_RS00290 (LV564_00290) 14807..16303 + 1497 WP_075595224.1 aldehyde dehydrogenase family protein -
LV564_RS00295 (LV564_00295) 16369..16497 + 129 Protein_17 alkene reductase -
LV564_RS00300 (LV564_00300) 16499..16615 + 117 Protein_18 hypothetical protein -
LV564_RS00305 (LV564_00305) 16646..17617 + 972 WP_075595225.1 LLM class oxidoreductase -
LV564_RS00310 (LV564_00310) 17677..17997 - 321 WP_075595226.1 hypothetical protein -
LV564_RS00315 (LV564_00315) 18044..18556 - 513 WP_242006319.1 hypothetical protein -
LV564_RS00320 (LV564_00320) 18549..18782 - 234 WP_035367701.1 hypothetical protein -
LV564_RS00325 (LV564_00325) 19114..19599 - 486 WP_228120936.1 hypothetical protein -
LV564_RS00330 (LV564_00330) 19697..20092 - 396 WP_035367697.1 hypothetical protein -
LV564_RS00335 (LV564_00335) 20244..20786 - 543 WP_035367704.1 hypothetical protein -
LV564_RS00340 (LV564_00340) 21557..21877 - 321 WP_035367763.1 hypothetical protein -
LV564_RS00345 (LV564_00345) 21941..22816 - 876 WP_035367761.1 DUF932 domain-containing protein -
LV564_RS00350 (LV564_00350) 23449..24117 + 669 WP_035367659.1 hypothetical protein -
LV564_RS00355 (LV564_00355) 24165..24425 + 261 WP_035367658.1 addiction module antidote protein -
LV564_RS00360 (LV564_00360) 24521..24718 - 198 WP_035367657.1 hypothetical protein -
LV564_RS00365 (LV564_00365) 24737..25156 - 420 WP_035367655.1 hypothetical protein -
LV564_RS00370 (LV564_00370) 25149..25391 - 243 WP_035367654.1 type II toxin-antitoxin system prevent-host-death family antitoxin -
LV564_RS00375 (LV564_00375) 25602..26066 - 465 WP_035367652.1 hypothetical protein -
LV564_RS00380 (LV564_00380) 26170..27102 + 933 WP_075594844.1 IS5 family transposase ISPlc1 Transposase
LV564_RS00385 (LV564_00385) 27231..27371 - 141 WP_255520139.1 NepR family anti-sigma factor -
LV564_RS00390 (LV564_00390) 27876..28892 + 1017 WP_228120835.1 Abi family protein -
LV564_RS00395 (LV564_00395) 29008..29313 + 306 WP_035367438.1 WGR domain-containing protein -
LV564_RS00400 (LV564_00400) 29506..30492 + 987 WP_075594846.1 hypothetical protein -
LV564_RS00405 (LV564_00405) 30737..31642 + 906 WP_007284615.1 replication protein RepA -
LV564_RS00410 (LV564_00410) 32905..33474 + 570 WP_035367432.1 Tn3 family transposase TnpR_ISRsp12 Transposase
LV564_RS00415 (LV564_00415) 33972..34334 + 363 WP_035367430.1 hypothetical protein -
LV564_RS00420 (LV564_00420) 34393..35103 + 711 WP_035367428.1 hypothetical protein VF
LV564_RS00425 (LV564_00425) 35107..35436 + 330 WP_035367427.1 pilin major subunit VirB2 -
LV564_RS00430 (LV564_00430) 35440..35763 + 324 WP_035367425.1 type IV secretion system protein VirB3 -
LV564_RS00435 (LV564_00435) 35764..38136 + 2373 WP_075594841.1 Protein virB4 VF
LV564_RS00440 (LV564_00440) 38155..38835 + 681 WP_035367423.1 type IV secretion system protein -
LV564_RS00445 (LV564_00445) 38845..39234 + 390 WP_035367422.1 EexN family lipoprotein -
LV564_RS00450 (LV564_00450) 39252..40178 + 927 WP_035367420.1 type IV secretion system protein -
LV564_RS00455 (LV564_00455) 40253..40390 + 138 WP_124326557.1 type IV secretion system lipoprotein VirB7 -
LV564_RS00460 (LV564_00460) 40387..41076 + 690 WP_075594838.1 type IV secretion system protein VirB8 -
LV564_RS00465 (LV564_00465) 41076..41993 + 918 WP_198911722.1 Protein virB9 VF
LV564_RS00470 (LV564_00470) 41990..43120 + 1131 WP_035367500.1 Protein virB10 VF
LV564_RS00475 (LV564_00475) 43110..44153 + 1044 WP_035367501.1 Type IV secretion system protein VirB11 VF
LV564_RS00480 (LV564_00480) 44164..45987 + 1824 WP_035367503.1 hypothetical protein VF
LV564_RS00485 (LV564_00485) 46182..46814 + 633 WP_035367504.1 TetR/AcrR family transcriptional regulator -
LV564_RS00490 (LV564_00490) 46872..47864 + 993 WP_010512215.1 MDR family oxidoreductase -
LV564_RS00495 (LV564_00495) 47896..48201 - 306 WP_010512214.1 helix-turn-helix transcriptional regulator -
LV564_RS00500 (LV564_00500) 48320..49444 - 1125 WP_035367506.1 alkene reductase -
LV564_RS00505 (LV564_00505) 49513..49650 - 138 WP_010512211.1 hypothetical protein -
LV564_RS00510 (LV564_00510) 49757..50452 - 696 WP_010512209.1 class I SAM-dependent methyltransferase -
LV564_RS00515 (LV564_00515) 50603..51409 + 807 WP_194265589.1 HTH-type transcriptional regulator NimR VF
LV564_RS00520 (LV564_00520) 51448..52071 - 624 WP_019088884.1 TetR/AcrR family transcriptional regulator -
LV564_RS00525 (LV564_00525) 52176..52745 + 570 WP_048851949.1 hydrolase -
LV564_RS00530 (LV564_00530) 52971..53282 + 312 Protein_64 IS5 family transposase ISMex35 Transposase
LV564_RS00535 (LV564_00535) 53324..56290 - 2967 WP_275881098.1 Tn3 family transposase TnpA_ISAzs17 Transposase
LV564_RS00540 (LV564_00540) 56411..57046 + 636 WP_275881080.1 Tn3 family transposase TnpR_ISMex22 Transposase
LV564_RS00545 (LV564_00545) 57289..58200 - 912 WP_275881140.1 L-dopachrome tautomerase-related protein -
LV564_RS00550 (LV564_00550) 58214..58648 - 435 WP_275881134.1 cupin domain-containing protein -
LV564_RS00555 (LV564_00555) 58645..59031 - 387 WP_253541632.1 nuclear transport factor 2 family protein -
LV564_RS00560 (LV564_00560) 59044..60064 - 1021 Protein_70 Zinc-type alcohol dehydrogenase-like protein VF
LV564_RS00565 (LV564_00565) 60165..60551 + 387 WP_275881096.1 helix-turn-helix domain-containing protein -
LV564_RS00570 (LV564_00570) 60839..62287 - 1449 WP_275881141.1 DUF2971 domain-containing protein -
LV564_RS00575 (LV564_00575) 62984..64177 - 1194 WP_275881142.1 Fic family protein -
LV564_RS00580 (LV564_00580) 64417..65388 + 972 WP_275881143.1 Tn3 family transposase TnpR_TnXo19 Transposase
LV564_RS00585 (LV564_00585) 65623..66942 + 1320 WP_275881148.1 chloride channel protein -
LV564_RS00590 (LV564_00590) 67193..68355 + 1163 Protein_76 ClC family H(+)/Cl(-) exchange transporter -
LV564_RS00595 (LV564_00595) 68796..69092 + 297 WP_275881144.1 WGR domain-containing protein -
LV564_RS00600 (LV564_00600) 69089..69724 + 636 WP_275881145.1 IS91 family transposase ISTha3 Transposase
LV564_RS00605 (LV564_00605) 69782..70024 + 243 WP_275881146.1 ribbon-helix-helix domain-containing protein -
LV564_RS00610 (LV564_00610) 70573..71232 + 660 WP_275881149.1 hypothetical protein VF
LV564_RS00615 (LV564_00615) 71260..71517 + 258 WP_081500038.1 hypothetical protein -
LV564_RS00620 (LV564_00620) 71557..72612 - 1056 WP_275881147.1 replication initiator protein A -
LV564_RS00625 (LV564_00625) 73661..73957 + 297 WP_275881099.1 BrnT family toxin -
LV564_RS00630 (LV564_00630) 73926..74270 + 345 WP_275881100.1 BrnA antitoxin family protein -
LV564_RS00635 (LV564_00635) 74324..74503 + 180 Protein_85 BrnT family toxin -
LV564_RS00640 (LV564_00640) 74463..74726 + 264 WP_275881101.1 BrnA antitoxin family protein -
LV564_RS00645 (LV564_00645) 74971..75252 - 282 WP_275881102.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LV564_RS00650 (LV564_00650) 75249..75536 - 288 WP_118963924.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
LV564_RS00655 (LV564_00655) 76270..76449 + 180 WP_019087453.1 type II toxin-antitoxin system HicA family toxin -
LV564_RS00660 (LV564_00660) 76460..76876 + 417 WP_275881103.1 type II toxin-antitoxin system HicB family antitoxin -
LV564_RS00665 (LV564_00665) 77161..77406 + 246 WP_275881104.1 plasmid stabilization protein -
LV564_RS00670 (LV564_00670) 77403..77825 + 423 WP_275881105.1 type II toxin-antitoxin system VapC family toxin -
LV564_RS00675 (LV564_00675) 77803..77979 - 177 WP_275881106.1 hypothetical protein -
LV564_RS00680 (LV564_00680) 78187..80247 - 2061 WP_275881107.1 phospholipase D family protein -
LV564_RS00685 (LV564_00685) 80571..80978 + 408 WP_275881108.1 DUF2442 domain-containing protein -
LV564_RS00690 (LV564_00690) 81392..81895 - 504 WP_275881109.1 MucR family transcriptional regulator -
LV564_RS00695 (LV564_00695) 81861..82070 - 210 Protein_97 conjugal transfer protein TraD -
LV564_RS00700 (LV564_00700) 82122..82457 - 336 WP_275881110.1 hypothetical protein -
LV564_RS00705 (LV564_00705) 82454..83065 - 612 WP_275881111.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase VF
LV564_RS00710 (LV564_00710) 83143..83376 - 234 WP_275881112.1 conjugal transfer protein TraD -
LV564_RS00715 (LV564_00715) 83441..83800 - 360 WP_275881150.1 conjugal transfer protein TraD -
LV564_RS00720 (LV564_00720) 83897..86980 + 3084 WP_275881151.1 ATP-dependent RecD-like DNA helicase Relaxase
LV564_RS00725 (LV564_00725) 87035..87229 + 195 WP_275881113.1 type II toxin-antitoxin system VapB family antitoxin -
LV564_RS00730 (LV564_00730) 87226..87618 + 393 WP_275881114.1 PIN domain nuclease -
LV564_RS00735 (LV564_00735) 87987..88238 + 252 WP_275881115.1 plasmid stabilization protein Antitoxin Detail
LV564_RS00740 (LV564_00740) 88235..88657 + 423 WP_275881116.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
LV564_RS00745 (LV564_00745) 88657..89325 + 669 WP_275881117.1 DUF6118 family protein -
LV564_RS00750 (LV564_00750) 89409..90475 + 1067 WP_275881118.1 IS630 family transposase -
LV564_RS00755 (LV564_00755) 90513..90920 - 408 WP_275881119.1 Rrf2 family transcriptional regulator -
LV564_RS00760 (LV564_00760) 90920..91189 - 270 WP_275881120.1 hypothetical protein -
LV564_RS00765 (LV564_00765) 91528..91914 - 387 WP_275881121.1 type II toxin-antitoxin system VapC family toxin -
LV564_RS00770 (LV564_00770) 91911..92156 - 246 WP_275881122.1 type II toxin-antitoxin system prevent-host-death family antitoxin -
LV564_RS00775 (LV564_00775) 92544..93197 + 654 WP_275881123.1 invasion associated locus B family protein -
LV564_RS00780 (LV564_00780) 93224..94963 + 1740 WP_275881124.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
LV564_RS00785 (LV564_00785) 94963..101049 + 6087 WP_275881125.1 hemagglutinin repeat-containing protein -
LV564_RS00790 (LV564_00790) 101033..101671 + 639 WP_275881126.1 hypothetical protein -
LV564_RS00795 (LV564_00795) 101754..102770 + 1017 WP_275881152.1 hemagglutinin repeat-containing protein -
LV564_RS00800 (LV564_00800) 102760..103380 + 621 WP_275881127.1 hypothetical protein -
LV564_RS00805 (LV564_00805) 103539..104171 + 633 WP_275881128.1 hypothetical protein -
LV564_RS00810 (LV564_00810) 104267..105349 + 1083 WP_275881129.1 hemagglutinin repeat-containing protein -
LV564_RS00815 (LV564_00815) 105333..105959 + 627 WP_275881130.1 hypothetical protein -
LV564_RS00820 (LV564_00820) 106062..106208 + 147 WP_275881131.1 hypothetical protein -
LV564_RS00825 (LV564_00825) 106225..107097 + 873 WP_275881132.1 hemagglutinin repeat-containing protein -
LV564_RS00830 (LV564_00830) 107084..107707 + 624 WP_275881133.1 hypothetical protein -
LV564_RS00835 (LV564_00835) 108388..109860 - 1473 WP_275881153.1 Tn3 family transposase TnpA_ISAzs17 Transposase
LV564_RS00840 (LV564_00840) 109839..111353 - 1515 WP_275881154.1 Tn3 family transposase TnpA_ISAcsp1 Transposase
LV564_RS00845 (LV564_00845) 111474..112109 + 636 WP_275881080.1 Tn3 family transposase TnpR_ISMex22 Transposase
LV564_RS00850 (LV564_00850) 112119..113243 - 1125 WP_275881079.1 L-dopachrome tautomerase-related protein -
LV564_RS00855 (LV564_00855) 113276..113710 - 435 WP_275881134.1 cupin domain-containing protein -
LV564_RS00860 (LV564_00860) 113707..114093 - 387 WP_253541632.1 nuclear transport factor 2 family protein -
LV564_RS00865 (LV564_00865) 114106..115124 - 1019 Protein_131 Zinc-type alcohol dehydrogenase-like protein VF
LV564_RS00870 (LV564_00870) 115225..115611 + 387 WP_275881096.1 helix-turn-helix domain-containing protein -
LV564_RS00875 (LV564_00875) 115630..116421 + 792 Protein_133 IS5 family transposase ISMex35 Transposase
LV564_RS00880 (LV564_00885) 116835..117890 + 1056 WP_039998265.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
LV564_RS00885 (LV564_00890) 117896..118717 + 822 WP_197603280.1 hypothetical protein -
LV564_RS00890 (LV564_00895) 118714..119247 + 534 WP_007396222.1 Rieske 2Fe-2S domain-containing protein -
LV564_RS00895 (LV564_00900) 119244..119885 + 642 WP_007396221.1 glutathione S-transferase N-terminal domain-containing protein -
LV564_RS00900 (LV564_00905) 119882..120829 + 948 WP_007396220.1 PDR/VanB family oxidoreductase -
LV564_RS00905 (LV564_00910) 120918..121064 + 147 WP_007396219.1 hypothetical protein -
LV564_RS00910 (LV564_00915) 121175..121846 + 672 WP_007396218.1 Rieske (2Fe-2S) protein -
LV564_RS00915 (LV564_00920) 121904..122758 + 855 WP_007396217.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
LV564_RS00920 (LV564_00925) 122760..123386 + 627 WP_007396216.1 glutathione S-transferase -
LV564_RS00925 (LV564_00930) 123761..124353 - 593 Protein_143 alcohol dehydrogenase catalytic domain-containing protein -
LV564_RS00930 (LV564_00935) 124608..125794 + 1187 WP_089179083.1 IS3 family transposase ISGxy1 Transposase
LV564_RS00935 (LV564_00940) 125872..126587 + 716 WP_275881155.1 IS5 family transposase ISAli12B Transposase
LV564_RS00940 (LV564_00945) 126597..127079 - 483 WP_197603276.1 VOC family protein -
LV564_RS00945 (LV564_00950) 127072..127416 - 345 WP_039998263.1 hypothetical protein -
LV564_RS00950 (LV564_00955) 127474..127791 - 318 WP_007396212.1 hypothetical protein -
LV564_RS00955 (LV564_00960) 127821..128900 - 1080 WP_048883869.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
LV564_RS00965 (LV564_00970) 130570..130740 + 171 Protein_151 IS5 family transposase ISRosp6 Transposase
LV564_RS00970 (LV564_00975) 131097..132038 + 942 WP_275881135.1 LysR family transcriptional regulator -
LV564_RS00975 (LV564_00980) 132477..133505 + 1029 WP_034928490.1 IS110 family transposase ISMdi12 Transposase
LV564_RS00980 (LV564_00985) 133867..134832 + 966 Protein_154 IS21 family transposase ISGdi17 Transposase
LV564_RS00985 (LV564_00990) 135024..135119 + 96 Protein_155 recombinase family protein -
LV564_RS00990 (LV564_00995) 135219..135998 + 780 WP_075624000.1 IS21 family transposase ISGdi17 Transposase
LV564_RS00995 (LV564_01000) 136085..137186 + 1102 Protein_157 IS91 family transposase ISMno24 Transposase
LV564_RS01000 (LV564_01005) 137628..138455 - 828 WP_075624153.1 S-formylglutathione hydrolase -
LV564_RS01005 (LV564_01010) 138480..138881 - 402 WP_003618982.1 VOC family protein -
LV564_RS01010 (LV564_01015) 138941..140050 - 1110 WP_003618980.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase -
LV564_RS01015 (LV564_01020) 140092..140367 - 276 WP_003626675.1 formaldehyde-responsive transcriptional repressor FrmR -
LV564_RS01020 (LV564_01025) 141013..142095 - 1083 WP_175575163.1 IS5 family transposase ISMex35 Transposase
LV564_RS01025 (LV564_01030) 142301..142441 + 141 WP_275881136.1 hypothetical protein -
LV564_RS01030 (LV564_01035) 142438..143868 - 1431 WP_275881137.1 hypothetical protein -
LV564_RS01035 (LV564_01040) 143868..144155 - 288 WP_075595253.1 IS3 family transposase ISGdi14 Transposase
LV564_RS01040 (LV564_01045) 144322..144711 - 390 WP_011251552.1 type II toxin-antitoxin system VapC family toxin -
LV564_RS01045 (LV564_01050) 144711..144977 - 267 WP_016738498.1 hypothetical protein -
LV564_RS01050 (LV564_01055) 145186..145779 + 594 WP_061507212.1 Tn3 family transposase TnpR_ISYps3 Transposase
LV564_RS01055 (LV564_01060) 145925..146371 - 447 WP_275881138.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance