MGE detailed information
MGE type: Genomic_island MGE length: 8770 bp
Accession: NZ_CP118537 Location: 1002964..1011733 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Accession: NZ_CP118537 Location: 1002964..1011733 Organism: Salmonella enterica subsp. enterica serovar Typhi strain S3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1A30_RS04875 (O1A30_04875) | 998391..1000958 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| O1A30_RS04880 (O1A30_04880) | 1001116..1001636 | + | 521 | Protein_956 | cytoplasmic protein | - |
| O1A30_RS04885 (O1A30_04885) | 1001806..1002462 | - | 657 | WP_000420463.1 | protein-serine/threonine phosphatase | - |
| O1A30_RS04890 (O1A30_04890) | 1002689..1003110 | + | 422 | Protein_958 | IS5/IS1182 family transposase | - |
| O1A30_RS04895 (O1A30_04895) | 1003183..1003710 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| O1A30_RS04900 (O1A30_04900) | 1003707..1003997 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| O1A30_RS04905 (O1A30_04905) | 1004267..1004467 | - | 201 | Protein_961 | transposase | - |
| O1A30_RS04910 (O1A30_04910) | 1004871..1005314 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| O1A30_RS04915 (O1A30_04915) | 1005770..1006420 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| O1A30_RS04920 (O1A30_04920) | 1006417..1008105 | + | 1689 | WP_000848103.1 | Type 3 secretion system secretin | VF |
| O1A30_RS04925 (O1A30_04925) | 1008102..1009220 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| O1A30_RS04930 (O1A30_04930) | 1009245..1011302 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| O1A30_RS04935 (O1A30_04935) | 1011326..1011733 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| O1A30_RS04940 (O1A30_04940) | 1011730..1013025 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| O1A30_RS04945 (O1A30_04945) | 1013003..1013446 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| O1A30_RS04950 (O1A30_04950) | 1013446..1014456 | + | 1011 | WP_000503113.1 | SPI-1 type III secretion system protein SpaN | - |
| O1A30_RS04955 (O1A30_04955) | 1014456..1015367 | + | 912 | WP_000058738.1 | SPI-1 type III secretion system protein SpaO | - |
| O1A30_RS04960 (O1A30_04960) | 1015357..1016031 | + | 675 | WP_000526019.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| O1A30_RS04965 (O1A30_04965) | 1016057..1016317 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|