MGE detailed information
MGE type: Genomic_island MGE length: 40947 bp
Accession: NZ_CP117698 Location: 3559686..3600632 Organism: Salmonella enterica subsp. enterica serovar London strain L1 Replicon: chromosome
Accession: NZ_CP117698 Location: 3559686..3600632 Organism: Salmonella enterica subsp. enterica serovar London strain L1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRJ38_RS17310 () | 3555257..3557701 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PRJ38_RS17315 () | 3557810..3558577 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PRJ38_RS17320 () | 3558948..3559355 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PRJ38_RS17325 () | 3559686..3560405 | + | 720 | WP_000787603.1 | hypothetical protein | VF |
| PRJ38_RS17330 () | 3560409..3560624 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PRJ38_RS17335 () | 3560744..3561691 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PRJ38_RS17340 () | 3562185..3562425 | - | 241 | Protein_3397 | PerC family transcriptional regulator | - |
| PRJ38_RS17345 () | 3562508..3563318 | - | 811 | Protein_3398 | hypothetical protein | VF |
| PRJ38_RS17350 () | 3563724..3564194 | - | 471 | WP_023255137.1 | AfaD family invasin | - |
| PRJ38_RS17355 () | 3564216..3566726 | - | 2511 | WP_023255136.1 | hypothetical protein | VF |
| PRJ38_RS17360 () | 3566750..3567487 | - | 738 | WP_058805822.1 | hypothetical protein | VF |
| PRJ38_RS17365 () | 3567571..3568065 | - | 495 | WP_187788956.1 | pilus assembly protein | - |
| PRJ38_RS17370 () | 3568830..3569531 | - | 702 | Protein_3403 | integrase core domain-containing protein | - |
| PRJ38_RS17375 () | 3569584..3569898 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| PRJ38_RS17380 () | 3569965..3570243 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| PRJ38_RS17385 () | 3570559..3571026 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| PRJ38_RS17390 () | 3571898..3572131 | - | 234 | WP_129374720.1 | hypothetical protein | - |
| - | 3572308..3572689 | - | 382 | - | - | Antitoxin Detail |
| PRJ38_RS17395 () | 3572465..3572740 | + | 276 | WP_058805824.1 | SymE family type I addiction module toxin | Toxin Detail |
| PRJ38_RS17400 () | 3572785..3573102 | - | 318 | WP_129374721.1 | hypothetical protein | - |
| PRJ38_RS17405 () | 3573068..3574351 | - | 1284 | Protein_3410 | hypothetical protein | VF |
| PRJ38_RS17410 () | 3574488..3574952 | - | 465 | WP_223152163.1 | hypothetical protein | - |
| PRJ38_RS17415 () | 3574930..3577761 | - | 2832 | WP_058805826.1 | RHS repeat-associated core domain-containing protein | - |
| PRJ38_RS17420 () | 3577812..3578090 | + | 279 | Protein_3413 | SymE family type I addiction module toxin | - |
| PRJ38_RS17425 () | 3578249..3579115 | - | 867 | WP_049868168.1 | leucine-rich repeat domain-containing protein | - |
| PRJ38_RS17430 () | 3579106..3583206 | - | 4101 | WP_223195405.1 | RHS repeat-associated core domain-containing protein | - |
| PRJ38_RS17435 () | 3583225..3583672 | - | 448 | Protein_3416 | DcrB-related protein | - |
| PRJ38_RS17440 () | 3583696..3585885 | - | 2190 | WP_058805827.1 | hypothetical protein | VF |
| PRJ38_RS17445 () | 3586282..3586803 | - | 522 | WP_077946913.1 | DUF2778 domain-containing protein | - |
| PRJ38_RS17450 () | 3586827..3587243 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PRJ38_RS17455 () | 3587240..3587335 | - | 96 | Protein_3420 | hypothetical protein | - |
| PRJ38_RS17460 () | 3587371..3587832 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| PRJ38_RS17465 () | 3587817..3588287 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PRJ38_RS17470 () | 3588330..3589097 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| PRJ38_RS17475 () | 3589097..3592966 | - | 3870 | WP_058805828.1 | hypothetical protein | VF |
| PRJ38_RS17480 () | 3593000..3593431 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| PRJ38_RS17485 () | 3593633..3594406 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| PRJ38_RS17490 () | 3594411..3595715 | - | 1305 | WP_000132483.1 | hypothetical protein | VF |
| PRJ38_RS17495 () | 3595712..3597055 | - | 1344 | WP_000118729.1 | hypothetical protein | VF |
| PRJ38_RS17500 () | 3597059..3597595 | - | 537 | WP_023255344.1 | hypothetical protein | VF |
| PRJ38_RS17505 () | 3597662..3598147 | - | 486 | WP_000119443.1 | hypothetical protein | VF |
| PRJ38_RS17510 () | 3598290..3598673 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PRJ38_RS17515 () | 3598658..3599143 | - | 486 | WP_058805829.1 | type VI secretion system amidase effector protein Tae4 | - |
| PRJ38_RS17520 () | 3599186..3599379 | - | 194 | Protein_3433 | type VI secretion system lipoprotein TssJ | - |
| PRJ38_RS17525 () | 3599447..3599932 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| PRJ38_RS17530 () | 3600186..3600518 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| PRJ38_RS17535 () | 3600645..3600755 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PRJ38_RS17540 () | 3600818..3602326 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PRJ38_RS17545 () | 3602350..3602892 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PRJ38_RS17550 () | 3602992..3605631 | - | 2640 | WP_058805830.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|