MGE detailed information
MGE type: Prophage MGE length: 29205 bp
Accession: NZ_CP117396 Location: 1882173..1911377 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Accession: NZ_CP117396 Location: 1882173..1911377 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP86_RS09005 (1878489) | 1878489..1880183 | - | 1695 | WP_010989035.1 | SEL1-like repeat protein | - |
| PQP86_RS09010 (1880867) | 1880867..1881145 | - | 279 | Protein_1761 | transposase | - |
| PQP86_RS09015 (1881231) | 1881231..1881698 | - | 468 | Protein_1762 | phage integrase N-terminal domain-containing protein | - |
| PQP86_RS09020 (1882173) | 1882173..1882646 | - | 474 | WP_001219015.1 | peptidase | - |
| PQP86_RS09030 (1883307) | 1883307..1883612 | - | 306 | Protein_1764 | Arm DNA-binding domain-containing protein | - |
| PQP86_RS09035 (1884028) | 1884028..1884558 | + | 531 | WP_162920401.1 | hypothetical protein | - |
| PQP86_RS09040 (1884698) | 1884698..1886098 | + | 1401 | WP_076741639.1 | hypothetical protein | - |
| PQP86_RS09045 (1886091) | 1886091..1886864 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| PQP86_RS09050 (1886861) | 1886861..1891444 | + | 4584 | WP_001017147.1 | chromosome partition protein MukB | - |
| PQP86_RS09055 (1891444) | 1891444..1892418 | + | 975 | WP_000548606.1 | DUF2220 family protein | - |
| PQP86_RS09060 (1892531) | 1892531..1893307 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| PQP86_RS09065 (1893304) | 1893304..1893873 | + | 570 | WP_199275335.1 | hypothetical protein | - |
| PQP86_RS09070 (1893866) | 1893866..1897258 | + | 3393 | WP_001000564.1 | UvrD-helicase domain-containing protein | - |
| PQP86_RS09075 (1897346) | 1897346..1898101 | + | 756 | WP_001089670.1 | multiubiquitin domain-containing protein | - |
| PQP86_RS09080 (1898076) | 1898076..1899260 | + | 1185 | WP_076741638.1 | ThiF family adenylyltransferase | - |
| PQP86_RS09085 (1899254) | 1899254..1899718 | + | 465 | WP_001660343.1 | DUF6527 family protein | - |
| PQP86_RS09090 (1900099) | 1900099..1900566 | + | 468 | WP_000201266.1 | hypothetical protein | - |
| PQP86_RS09095 (1900563) | 1900563..1900784 | + | 222 | WP_000813787.1 | helix-turn-helix transcriptional regulator | - |
| PQP86_RS09100 (1901281) | 1901281..1901634 | + | 354 | WP_000269842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP86_RS09105 (1901639) | 1901639..1901941 | + | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP86_RS09110 (1902447) | 1902447..1903331 | + | 885 | WP_000511750.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PQP86_RS09115 (1904200) | 1904200..1905462 | - | 1263 | WP_076741637.1 | hypothetical protein ; Integrase | Integrase |
| PQP86_RS09125 (1905800) | 1905800..1906597 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| PQP86_RS09135 (1907078) | 1907078..1907239 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| PQP86_RS09140 (1907366) | 1907366..1907785 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP86_RS09145 (1907788) | 1907788..1909056 | + | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| PQP86_RS09150 (1909511) | 1909511..1909723 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| PQP86_RS09155 (1909734) | 1909734..1909922 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| PQP86_RS09160 (1910166) | 1910166..1911377 | - | 1212 | WP_001080675.1 | porin OmpC | - |
| PQP86_RS09165 (1912027) | 1912027..1912326 | + | 300 | WP_000107430.1 | cell division protein DrpB | - |
| PQP86_RS09170 (1912418) | 1912418..1913113 | + | 696 | WP_000377042.1 | phosphohydrolase | - |
| PQP86_RS09175 (1913187) | 1913187..1914617 | + | 1431 | WP_001157294.1 | DNA cytosine methyltransferase | - |
| PQP86_RS09180 (1914598) | 1914598..1915068 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| PQP86_RS09185 (1915057) | 1915057..1915977 | - | 921 | WP_001212265.1 | drug/metabolite exporter YedA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|