MGE detailed information
MGE type: Conjugative plasmid MGE length: 100526 bp
Accession: NZ_CP117389 Location: 1..100526 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: plasmid pRM010_1
Accession: NZ_CP117389 Location: 1..100526 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: plasmid pRM010_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ04_RS23430 (PQQ04_23430) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQQ04_RS23435 (PQQ04_23435) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQQ04_RS23440 (PQQ04_23440) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQQ04_RS23445 (PQQ04_23445) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQQ04_RS23450 (PQQ04_23450) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQQ04_RS23455 (PQQ04_23455) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQQ04_RS23460 (PQQ04_23460) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQQ04_RS23465 (PQQ04_23465) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQQ04_RS23470 (PQQ04_23470) | 6511..7365 | + | 855 | WP_274895178.1 | hypothetical protein | - |
| PQQ04_RS23475 (PQQ04_23475) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQQ04_RS23480 (PQQ04_23480) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQQ04_RS23485 (PQQ04_23485) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQQ04_RS23490 (PQQ04_23490) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQQ04_RS23495 (PQQ04_23495) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQQ04_RS23500 (PQQ04_23500) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQQ04_RS23505 (PQQ04_23505) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQQ04_RS23510 (PQQ04_23510) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQQ04_RS23515 (PQQ04_23515) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQQ04_RS23520 (PQQ04_23520) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQQ04_RS23525 (PQQ04_23525) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQQ04_RS23530 (PQQ04_23530) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQQ04_RS23535 (PQQ04_23535) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ04_RS23540 (PQQ04_23540) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQQ04_RS23545 (PQQ04_23545) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQQ04_RS23550 (PQQ04_23550) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQQ04_RS23555 (PQQ04_23555) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQQ04_RS23560 (PQQ04_23560) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQQ04_RS23565 (PQQ04_23565) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQQ04_RS23570 (PQQ04_23570) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQQ04_RS23575 (PQQ04_23575) | 18007..18711 | - | 705 | WP_274895175.1 | IS6 family transposase IS26 | Transposase |
| PQQ04_RS23580 (PQQ04_23580) | 18776..18955 | - | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQQ04_RS23585 (PQQ04_23585) | 19262..19966 | + | 705 | WP_274895175.1 | IS6 family transposase IS26 | Transposase |
| PQQ04_RS23590 (PQQ04_23590) | 19972..20112 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQQ04_RS23595 (PQQ04_23595) | 20598..21335 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQQ04_RS23600 (PQQ04_23600) | 21332..21556 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQQ04_RS23605 (PQQ04_23605) | 21767..23260 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQQ04_RS23610 (PQQ04_23610) | 23291..24175 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PQQ04_RS23615 (PQQ04_23615) | 24392..25606 | + | 1215 | WP_000214121.1 | Multidrug resistance protein MdtL | ARG |
| PQQ04_RS23620 (PQQ04_23620) | 25634..25939 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| PQQ04_RS23625 (PQQ04_23625) | 26051..26239 | + | 189 | Protein_40 | IS91 family transposase | - |
| PQQ04_RS23630 (PQQ04_23630) | 26206..27405 | - | 1200 | WP_274891468.1 | Multidrug resistance protein MdtG | ARG |
| PQQ04_RS23635 (PQQ04_23635) | 27511..28161 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQQ04_RS23640 (PQQ04_23640) | 28193..28435 | - | 243 | WP_000844627.1 | transposase | - |
| PQQ04_RS23645 (PQQ04_23645) | 28741..29577 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQQ04_RS23650 (PQQ04_23650) | 29577..30380 | - | 804 | WP_274895179.1 | hypothetical protein | ARG |
| PQQ04_RS23655 (PQQ04_23655) | 30441..31256 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| PQQ04_RS23660 (PQQ04_23660) | 31563..31874 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQQ04_RS23665 (PQQ04_23665) | 32048..32833 | + | 786 | WP_274895180.1 | Iron-sulfur cluster carrier protein | VF |
| PQQ04_RS23670 (PQQ04_23670) | 32837..34018 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQQ04_RS23675 (PQQ04_23675) | 34067..34339 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQQ04_RS23680 (PQQ04_23680) | 34392..35027 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQQ04_RS23685 (PQQ04_23685) | 35119..35262 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQQ04_RS23690 (PQQ04_23690) | 35589..35966 | + | 378 | WP_137516508.1 | hypothetical protein | - |
| PQQ04_RS23695 (PQQ04_23695) | 35959..36240 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQQ04_RS23700 (PQQ04_23700) | 36215..36889 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQQ04_RS23705 (PQQ04_23705) | 36882..37388 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQQ04_RS23710 (PQQ04_23710) | 37394..37705 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQQ04_RS23715 (PQQ04_23715) | 37714..38214 | + | 501 | WP_274895181.1 | hypothetical protein | - |
| PQQ04_RS23720 (PQQ04_23720) | 38218..39645 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQQ04_RS23725 (PQQ04_23725) | 39645..40301 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQQ04_RS23730 (PQQ04_23730) | 40357..40974 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQQ04_RS23735 (PQQ04_23735) | 41207..41485 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQQ04_RS23740 (PQQ04_23740) | 41576..42064 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQQ04_RS23745 (PQQ04_23745) | 42079..44271 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQQ04_RS23750 (PQQ04_23750) | 44271..44504 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQQ04_RS23755 (PQQ04_23755) | 44486..45103 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQQ04_RS23760 (PQQ04_23760) | 45271..48243 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQQ04_RS23765 (PQQ04_23765) | 48240..50105 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| PQQ04_RS23770 (PQQ04_23770) | 50155..50700 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQQ04_RS23775 (PQQ04_23775) | 50657..51286 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQQ04_RS23780 (PQQ04_23780) | 51296..51742 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| PQQ04_RS23785 (PQQ04_23785) | 51752..52129 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQQ04_RS23790 (PQQ04_23790) | 52129..52791 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQQ04_RS23795 (PQQ04_23795) | 53127..53492 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQQ04_RS23800 (PQQ04_23800) | 53637..53918 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQQ04_RS23805 (PQQ04_23805) | 53915..54541 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQQ04_RS23810 (PQQ04_23810) | 54525..55442 | + | 918 | WP_274895173.1 | type-F conjugative transfer system secretin TraK | - |
| PQQ04_RS23815 (PQQ04_23815) | 55442..56755 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| PQQ04_RS23820 (PQQ04_23820) | 56752..57330 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQQ04_RS23825 (PQQ04_23825) | 57334..57726 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQQ04_RS23830 (PQQ04_23830) | 58011..59273 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQQ04_RS23835 (PQQ04_23835) | 59597..60742 | + | 1146 | WP_000976514.1 | D-aminopeptidase | ARG |
| PQQ04_RS23840 (PQQ04_23840) | 60836..61369 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| PQQ04_RS23845 (PQQ04_23845) | 61366..61683 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQQ04_RS23850 (PQQ04_23850) | 62411..64351 | + | 1941 | WP_274877889.1 | DUF4165 domain-containing protein | - |
| PQQ04_RS23855 (PQQ04_23855) | 64242..64946 | - | 705 | WP_274895175.1 | IS6 family transposase IS26 | Transposase |
| PQQ04_RS23860 (PQQ04_23860) | 65009..65713 | - | 705 | WP_274895175.1 | IS6 family transposase IS26 | Transposase |
| PQQ04_RS23865 (PQQ04_23865) | 65923..66912 | - | 990 | WP_001276635.1 | hypothetical protein | VF |
| PQQ04_RS23870 (PQQ04_23870) | 66909..67145 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| PQQ04_RS23875 (PQQ04_23875) | 67142..67507 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| PQQ04_RS23880 (PQQ04_23880) | 67619..68257 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| PQQ04_RS23885 (PQQ04_23885) | 68272..69957 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| PQQ04_RS23890 (PQQ04_23890) | 70029..70304 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| PQQ04_RS23895 (PQQ04_23895) | 70320..70670 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| PQQ04_RS23900 (PQQ04_23900) | 70742..71176 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| PQQ04_RS23905 (PQQ04_23905) | 71276..72280 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| PQQ04_RS23910 (PQQ04_23910) | 72557..72676 | + | 120 | Protein_97 | permease | - |
| PQQ04_RS23915 (PQQ04_23915) | 72686..72802 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| PQQ04_RS23920 (PQQ04_23920) | 72923..73297 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| PQQ04_RS23925 (PQQ04_23925) | 73411..74136 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| PQQ04_RS23930 (PQQ04_23930) | 74377..78522 | + | 4146 | WP_274895176.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ04_RS23935 (PQQ04_23935) | 78512..78934 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQQ04_RS23940 (PQQ04_23940) | 79105..79556 | + | 452 | Protein_103 | hypothetical protein | - |
| PQQ04_RS23945 (PQQ04_23945) | 79572..80174 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQQ04_RS23950 (PQQ04_23950) | 80444..80725 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQQ04_RS23955 (PQQ04_23955) | 81024..81560 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQQ04_RS23960 (PQQ04_23960) | 81563..82573 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQQ04_RS23965 (PQQ04_23965) | 82578..83447 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| PQQ04_RS23970 (PQQ04_23970) | 83444..83935 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQQ04_RS23975 (PQQ04_23975) | 84262..85137 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQQ04_RS23980 (PQQ04_23980) | 85299..86339 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| PQQ04_RS23985 (PQQ04_23985) | 86626..88137 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQQ04_RS23990 (PQQ04_23990) | 88248..89288 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQQ04_RS23995 (PQQ04_23995) | 89290..90723 | + | 1434 | WP_274895177.1 | conjugal transfer protein TraH | - |
| PQQ04_RS24000 (PQQ04_24000) | 90736..94350 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQQ04_RS24005 (PQQ04_24005) | 94388..94750 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQQ04_RS24010 (PQQ04_24010) | 95466..95738 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQQ04_RS24015 (PQQ04_24015) | 95738..96271 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQQ04_RS24020 (PQQ04_24020) | 96282..96890 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQQ04_RS24025 (PQQ04_24025) | 96887..97438 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| PQQ04_RS24030 (PQQ04_24030) | 97498..97917 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQQ04_RS24035 (PQQ04_24035) | 97919..98212 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQQ04_RS24040 (PQQ04_24040) | 98229..99212 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQQ04_RS24045 (PQQ04_24045) | 99711..100250 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|