MGE detailed information
MGE type: Genomic_island MGE length: 9774 bp
Accession: NZ_CP117384 Location: 849191..858964 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Accession: NZ_CP117384 Location: 849191..858964 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP89_RS04140 (844287) | 844287..845385 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQP89_RS04145 (845395) | 845395..846912 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP89_RS04150 (846988) | 846988..847533 | - | 546 | WP_050067887.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP89_RS04155 (847798) | 847798..848556 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP89_RS04165 (848802) | 848802..849014 | - | 213 | WP_024152440.1 | hypothetical protein | - |
| PQP89_RS04170 (849191) | 849191..849418 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP89_RS04175 (849418) | 849418..849816 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP89_RS04180 (850625) | 850625..851161 | + | 537 | WP_001038503.1 | Attachment invasion locus protein | VF |
| PQP89_RS04185 (851208) | 851208..851840 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP89_RS04190 (852559) | 852559..853146 | + | 588 | WP_001244643.1 | putative fimbrial-like protein YbgD | VF |
| PQP89_RS04195 (853266) | 853266..855755 | + | 2490 | WP_000705490.1 | Outer membrane usher protein PapC | VF |
| PQP89_RS04200 (855796) | 855796..856539 | + | 744 | WP_000798502.1 | Chaperone protein PapD | VF |
| PQP89_RS04205 (856536) | 856536..857606 | + | 1071 | WP_000147757.1 | hypothetical protein | - |
| PQP89_RS04210 (857713) | 857713..858219 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP89_RS04215 (858206) | 858206..858964 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP89_RS04220 (859174) | 859174..860016 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| PQP89_RS04225 (860138) | 860138..860410 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP89_RS04230 (860441) | 860441..861670 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PQP89_RS04235 (861812) | 861812..862267 | - | 456 | WP_001653678.1 | multidrug/biocide efflux PACE transporter | - |
| PQP89_RS04240 (862371) | 862371..863234 | + | 864 | WP_001270775.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|