MGE detailed information
MGE type: Conjugative plasmid MGE length: 100649 bp
Accession: NZ_CP117383 Location: 1..100649 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: plasmid pRM018_1
Accession: NZ_CP117383 Location: 1..100649 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: plasmid pRM018_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS23420 (PQP98_23420) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQP98_RS23425 (PQP98_23425) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQP98_RS23430 (PQP98_23430) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQP98_RS23435 (PQP98_23435) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQP98_RS23440 (PQP98_23440) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQP98_RS23445 (PQP98_23445) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQP98_RS23450 (PQP98_23450) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQP98_RS23455 (PQP98_23455) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQP98_RS23460 (PQP98_23460) | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| PQP98_RS23465 (PQP98_23465) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQP98_RS23470 (PQP98_23470) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQP98_RS23475 (PQP98_23475) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQP98_RS23480 (PQP98_23480) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQP98_RS23485 (PQP98_23485) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQP98_RS23490 (PQP98_23490) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQP98_RS23495 (PQP98_23495) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQP98_RS23500 (PQP98_23500) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQP98_RS23505 (PQP98_23505) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQP98_RS23510 (PQP98_23510) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQP98_RS23515 (PQP98_23515) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQP98_RS23520 (PQP98_23520) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP98_RS23525 (PQP98_23525) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP98_RS23530 (PQP98_23530) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQP98_RS23535 (PQP98_23535) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQP98_RS23540 (PQP98_23540) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQP98_RS23545 (PQP98_23545) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQP98_RS23550 (PQP98_23550) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQP98_RS23555 (PQP98_23555) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQP98_RS23560 (PQP98_23560) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQP98_RS23565 (PQP98_23565) | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP98_RS23570 (PQP98_23570) | 18776..18955 | - | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQP98_RS23575 (PQP98_23575) | 19262..19966 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP98_RS23580 (PQP98_23580) | 19972..20112 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQP98_RS23585 (PQP98_23585) | 20598..21335 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQP98_RS23590 (PQP98_23590) | 21332..21556 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQP98_RS23595 (PQP98_23595) | 21767..23260 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQP98_RS23600 (PQP98_23600) | 23291..24175 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PQP98_RS23605 (PQP98_23605) | 24392..25606 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| PQP98_RS23610 (PQP98_23610) | 25634..25939 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| PQP98_RS23615 (PQP98_23615) | 26051..26239 | + | 189 | Protein_40 | IS91 family transposase | - |
| PQP98_RS23620 (PQP98_23620) | 26206..27405 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| PQP98_RS23625 (PQP98_23625) | 27511..28161 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQP98_RS23630 (PQP98_23630) | 28193..28455 | - | 263 | Protein_43 | relaxase | - |
| PQP98_RS23635 (PQP98_23635) | 28759..29700 | - | 942 | Protein_44 | hypothetical protein | ARG |
| PQP98_RS23640 (PQP98_23640) | 29700..30503 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQP98_RS23645 (PQP98_23645) | 30564..31379 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQP98_RS23650 (PQP98_23650) | 31686..31997 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQP98_RS23655 (PQP98_23655) | 32171..32956 | + | 786 | WP_274877894.1 | Sporulation initiation inhibitor protein Soj | VF |
| PQP98_RS23660 (PQP98_23660) | 32960..34141 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQP98_RS23665 (PQP98_23665) | 34190..34462 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQP98_RS23670 (PQP98_23670) | 34515..35150 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQP98_RS23675 (PQP98_23675) | 35242..35385 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQP98_RS23680 (PQP98_23680) | 35712..36089 | + | 378 | WP_137516508.1 | hypothetical protein | - |
| PQP98_RS23685 (PQP98_23685) | 36082..36363 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQP98_RS23690 (PQP98_23690) | 36338..37012 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQP98_RS23695 (PQP98_23695) | 37005..37511 | + | 507 | WP_000566443.1 | hypothetical protein | - |
| PQP98_RS23700 (PQP98_23700) | 37517..37828 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQP98_RS23705 (PQP98_23705) | 37837..38337 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQP98_RS23710 (PQP98_23710) | 38341..39768 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQP98_RS23715 (PQP98_23715) | 39768..40424 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQP98_RS23720 (PQP98_23720) | 40480..41097 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQP98_RS23725 (PQP98_23725) | 41330..41608 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQP98_RS23730 (PQP98_23730) | 41699..42187 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQP98_RS23735 (PQP98_23735) | 42202..44394 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQP98_RS23740 (PQP98_23740) | 44394..44627 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQP98_RS23745 (PQP98_23745) | 44609..45226 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQP98_RS23750 (PQP98_23750) | 45394..48366 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQP98_RS23755 (PQP98_23755) | 48363..50228 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| PQP98_RS23760 (PQP98_23760) | 50278..50823 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQP98_RS23765 (PQP98_23765) | 50780..51409 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQP98_RS23770 (PQP98_23770) | 51419..51865 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| PQP98_RS23775 (PQP98_23775) | 51875..52252 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQP98_RS23780 (PQP98_23780) | 52252..52914 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQP98_RS23785 (PQP98_23785) | 53250..53615 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQP98_RS23790 (PQP98_23790) | 53760..54041 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQP98_RS23795 (PQP98_23795) | 54038..54664 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQP98_RS23800 (PQP98_23800) | 54648..55565 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| PQP98_RS23805 (PQP98_23805) | 55565..56878 | + | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
| PQP98_RS23810 (PQP98_23810) | 56875..57453 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQP98_RS23815 (PQP98_23815) | 57457..57849 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQP98_RS23820 (PQP98_23820) | 58134..59396 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQP98_RS23825 (PQP98_23825) | 59720..60865 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQP98_RS23830 (PQP98_23830) | 60959..61492 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| PQP98_RS23835 (PQP98_23835) | 61489..61806 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQP98_RS23840 (PQP98_23840) | 62534..64474 | + | 1941 | WP_274877889.1 | DUF4165 domain-containing protein | - |
| PQP98_RS23845 (PQP98_23845) | 64365..65069 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP98_RS23850 (PQP98_23850) | 65132..65836 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP98_RS23855 (PQP98_23855) | 66046..67035 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
| PQP98_RS23860 (PQP98_23860) | 67032..67268 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| PQP98_RS23865 (PQP98_23865) | 67265..67630 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| PQP98_RS23870 (PQP98_23870) | 67742..68380 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| PQP98_RS23875 (PQP98_23875) | 68395..70080 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| PQP98_RS23880 (PQP98_23880) | 70152..70427 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| PQP98_RS23885 (PQP98_23885) | 70443..70793 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| PQP98_RS23890 (PQP98_23890) | 70865..71299 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| PQP98_RS23895 (PQP98_23895) | 71399..72403 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| PQP98_RS23900 (PQP98_23900) | 72680..72799 | + | 120 | Protein_97 | permease | - |
| PQP98_RS23905 (PQP98_23905) | 72809..72925 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| PQP98_RS23910 (PQP98_23910) | 73046..73420 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| PQP98_RS23915 (PQP98_23915) | 73534..74259 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| PQP98_RS23920 (PQP98_23920) | 74500..78645 | + | 4146 | WP_274877891.1 | RHS repeat-associated core domain-containing protein | - |
| PQP98_RS23925 (PQP98_23925) | 78635..79057 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQP98_RS23930 (PQP98_23930) | 79228..79680 | + | 453 | Protein_103 | hypothetical protein | - |
| PQP98_RS23935 (PQP98_23935) | 79696..80297 | - | 602 | Protein_104 | hypothetical protein | - |
| PQP98_RS23940 (PQP98_23940) | 80567..80848 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQP98_RS23945 (PQP98_23945) | 81147..81683 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQP98_RS23950 (PQP98_23950) | 81686..82696 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQP98_RS23955 (PQP98_23955) | 82701..83570 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| PQP98_RS23960 (PQP98_23960) | 83567..84058 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQP98_RS23965 (PQP98_23965) | 84385..85260 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQP98_RS23970 (PQP98_23970) | 85422..86459 | + | 1038 | Protein_111 | DNA-binding protein | - |
| PQP98_RS23975 (PQP98_23975) | 86749..88260 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQP98_RS23980 (PQP98_23980) | 88371..89411 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQP98_RS23985 (PQP98_23985) | 89413..90846 | + | 1434 | WP_274877892.1 | conjugal transfer protein TraH | - |
| PQP98_RS23990 (PQP98_23990) | 90859..94473 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQP98_RS23995 (PQP98_23995) | 94511..94873 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQP98_RS24000 (PQP98_24000) | 95589..95861 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQP98_RS24005 (PQP98_24005) | 95861..96394 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQP98_RS24010 (PQP98_24010) | 96405..97013 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQP98_RS24015 (PQP98_24015) | 97010..97561 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
| PQP98_RS24020 (PQP98_24020) | 97621..98040 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQP98_RS24025 (PQP98_24025) | 98042..98335 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQP98_RS24030 (PQP98_24030) | 98352..99335 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQP98_RS24035 (PQP98_24035) | 99834..100373 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|