MGE detailed information
MGE type: Conjugative plasmid MGE length: 99202 bp
Accession: NZ_CP117381 Location: 1..99202 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: plasmid pRM037_1
Accession: NZ_CP117381 Location: 1..99202 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: plasmid pRM037_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP93_RS23685 (PQP93_23685) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
| PQP93_RS23690 (PQP93_23690) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| PQP93_RS23695 (PQP93_23695) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PQP93_RS23700 (PQP93_23700) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| PQP93_RS23705 (PQP93_23705) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| PQP93_RS23710 (PQP93_23710) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| PQP93_RS23715 (PQP93_23715) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| PQP93_RS23720 (PQP93_23720) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| PQP93_RS23725 (PQP93_23725) | 6511..7365 | + | 855 | WP_274890349.1 | hypothetical protein | - |
| PQP93_RS23730 (PQP93_23730) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| PQP93_RS23735 (PQP93_23735) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| PQP93_RS23740 (PQP93_23740) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| PQP93_RS23745 (PQP93_23745) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| PQP93_RS23750 (PQP93_23750) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| PQP93_RS23755 (PQP93_23755) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| PQP93_RS23760 (PQP93_23760) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| PQP93_RS23765 (PQP93_23765) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| PQP93_RS23770 (PQP93_23770) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| PQP93_RS23775 (PQP93_23775) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| PQP93_RS23780 (PQP93_23780) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| PQP93_RS23785 (PQP93_23785) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP93_RS23790 (PQP93_23790) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP93_RS23795 (PQP93_23795) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| PQP93_RS23800 (PQP93_23800) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| PQP93_RS23805 (PQP93_23805) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| PQP93_RS23810 (PQP93_23810) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| PQP93_RS23815 (PQP93_23815) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| PQP93_RS23820 (PQP93_23820) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| PQP93_RS23825 (PQP93_23825) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| PQP93_RS23830 (PQP93_23830) | 18007..18711 | - | 705 | WP_274890350.1 | IS6 family transposase IS26 | Transposase |
| PQP93_RS23835 (PQP93_23835) | 18776..18955 | - | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
| PQP93_RS23840 (PQP93_23840) | 19262..19966 | + | 705 | WP_274890350.1 | IS6 family transposase IS26 | Transposase |
| PQP93_RS23845 (PQP93_23845) | 19972..20112 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PQP93_RS23850 (PQP93_23850) | 20598..21335 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQP93_RS23855 (PQP93_23855) | 21332..21556 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| PQP93_RS23860 (PQP93_23860) | 21767..23260 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| PQP93_RS23865 (PQP93_23865) | 23291..24175 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PQP93_RS23870 (PQP93_23870) | 24392..25606 | + | 1215 | WP_000214123.1 | Inner membrane transport protein YdhC | ARG |
| PQP93_RS23875 (PQP93_23875) | 25634..25939 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| PQP93_RS23880 (PQP93_23880) | 26051..26239 | + | 189 | Protein_40 | IS91 family transposase | - |
| PQP93_RS23885 (PQP93_23885) | 26206..27404 | - | 1199 | Protein_41 | tetracycline efflux MFS transporter Tet(A) | - |
| PQP93_RS23890 (PQP93_23890) | 27510..28160 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQP93_RS23895 (PQP93_23895) | 28192..28434 | - | 243 | WP_000844627.1 | transposase | - |
| PQP93_RS23900 (PQP93_23900) | 28740..29576 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQP93_RS23905 (PQP93_23905) | 29576..30379 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQP93_RS23910 (PQP93_23910) | 30440..31255 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQP93_RS23915 (PQP93_23915) | 31562..31873 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| PQP93_RS23920 (PQP93_23920) | 32047..32832 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| PQP93_RS23925 (PQP93_23925) | 32836..34017 | + | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
| PQP93_RS23930 (PQP93_23930) | 34066..34338 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| PQP93_RS23935 (PQP93_23935) | 34391..35026 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| PQP93_RS23940 (PQP93_23940) | 35118..35261 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| PQP93_RS23945 (PQP93_23945) | 35588..35965 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| PQP93_RS23950 (PQP93_23950) | 35958..36239 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| PQP93_RS23955 (PQP93_23955) | 36214..36888 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| PQP93_RS23960 (PQP93_23960) | 36881..37387 | + | 507 | WP_274890351.1 | hypothetical protein | - |
| PQP93_RS23965 (PQP93_23965) | 37393..37704 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| PQP93_RS23970 (PQP93_23970) | 37713..38213 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| PQP93_RS23975 (PQP93_23975) | 38217..39644 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| PQP93_RS23980 (PQP93_23980) | 39644..40300 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| PQP93_RS23985 (PQP93_23985) | 40356..40973 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| PQP93_RS23990 (PQP93_23990) | 41206..41484 | + | 279 | WP_000746034.1 | hypothetical protein | - |
| PQP93_RS23995 (PQP93_23995) | 41575..42063 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| PQP93_RS24000 (PQP93_24000) | 42078..44270 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| PQP93_RS24005 (PQP93_24005) | 44270..44503 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| PQP93_RS24010 (PQP93_24010) | 44485..45102 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| PQP93_RS24015 (PQP93_24015) | 45270..48242 | + | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
| PQP93_RS24020 (PQP93_24020) | 48239..50104 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| PQP93_RS24025 (PQP93_24025) | 50154..50699 | + | 546 | WP_000228720.1 | hypothetical protein | - |
| PQP93_RS24030 (PQP93_24030) | 50656..51285 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| PQP93_RS24035 (PQP93_24035) | 51295..51741 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| PQP93_RS24040 (PQP93_24040) | 51751..52128 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| PQP93_RS24045 (PQP93_24045) | 52128..52790 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| PQP93_RS24050 (PQP93_24050) | 53126..53491 | + | 366 | WP_001052530.1 | hypothetical protein | - |
| PQP93_RS24055 (PQP93_24055) | 53636..53917 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| PQP93_RS24060 (PQP93_24060) | 53914..54540 | + | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PQP93_RS24065 (PQP93_24065) | 54524..55441 | + | 918 | WP_274890347.1 | type-F conjugative transfer system secretin TraK | - |
| PQP93_RS24070 (PQP93_24070) | 55441..56754 | + | 1314 | WP_274890352.1 | TrbI/VirB10 family protein | - |
| PQP93_RS24075 (PQP93_24075) | 56751..57329 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PQP93_RS24080 (PQP93_24080) | 57333..57725 | + | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
| PQP93_RS24085 (PQP93_24085) | 58010..59272 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQP93_RS24090 (PQP93_24090) | 59596..60741 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| PQP93_RS24095 (PQP93_24095) | 60835..61368 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| PQP93_RS24100 (PQP93_24100) | 61365..61682 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PQP93_RS24105 (PQP93_24105) | 62410..62865 | + | 456 | Protein_85 | DUF4165 domain-containing protein | - |
| PQP93_RS24110 (PQP93_24110) | 62920..63624 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PQP93_RS24115 (PQP93_24115) | 63687..64391 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PQP93_RS24120 (PQP93_24120) | 64601..65590 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
| PQP93_RS24125 (PQP93_24125) | 65587..65823 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| PQP93_RS24130 (PQP93_24130) | 65820..66185 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| PQP93_RS24135 (PQP93_24135) | 66297..66935 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| PQP93_RS24140 (PQP93_24140) | 66950..68635 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| PQP93_RS24145 (PQP93_24145) | 68707..68982 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| PQP93_RS24150 (PQP93_24150) | 68998..69348 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| PQP93_RS24155 (PQP93_24155) | 69420..69854 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| PQP93_RS24160 (PQP93_24160) | 69954..70958 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| PQP93_RS24165 (PQP93_24165) | 71235..71354 | + | 120 | Protein_97 | permease | - |
| PQP93_RS24170 (PQP93_24170) | 71364..71480 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| PQP93_RS24175 (PQP93_24175) | 71601..71975 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| PQP93_RS24180 (PQP93_24180) | 72089..72814 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| PQP93_RS24185 (PQP93_24185) | 73055..77200 | + | 4146 | WP_274890348.1 | RHS repeat-associated core domain-containing protein | - |
| PQP93_RS24190 (PQP93_24190) | 77190..77612 | + | 423 | WP_001165345.1 | hypothetical protein | - |
| PQP93_RS24195 (PQP93_24195) | 77783..78235 | + | 453 | Protein_103 | hypothetical protein | - |
| PQP93_RS24200 (PQP93_24200) | 78251..78853 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| PQP93_RS24205 (PQP93_24205) | 79123..79404 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| PQP93_RS24210 (PQP93_24210) | 79703..80239 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| PQP93_RS24215 (PQP93_24215) | 80242..81252 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| PQP93_RS24220 (PQP93_24220) | 81257..82126 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| PQP93_RS24225 (PQP93_24225) | 82123..82614 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| PQP93_RS24230 (PQP93_24230) | 82941..83816 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| PQP93_RS24235 (PQP93_24235) | 83978..85006 | + | 1029 | Protein_111 | DNA-binding protein | - |
| PQP93_RS24240 (PQP93_24240) | 85303..86814 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| PQP93_RS24245 (PQP93_24245) | 86925..87965 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| PQP93_RS24250 (PQP93_24250) | 87967..89400 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| PQP93_RS24255 (PQP93_24255) | 89413..93027 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PQP93_RS24260 (PQP93_24260) | 93065..93427 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| PQP93_RS24265 (PQP93_24265) | 94143..94415 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| PQP93_RS24270 (PQP93_24270) | 94415..94948 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| PQP93_RS24275 (PQP93_24275) | 94959..95567 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| PQP93_RS24280 (PQP93_24280) | 95564..96114 | + | 551 | Protein_120 | FlhC family transcriptional regulator | - |
| PQP93_RS24285 (PQP93_24285) | 96174..96593 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
| PQP93_RS24290 (PQP93_24290) | 96595..96888 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| PQP93_RS24295 (PQP93_24295) | 96905..97888 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| PQP93_RS24300 (PQP93_24300) | 98387..98926 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|