MGE detailed information
MGE type: Prophage MGE length: 8690 bp
Accession: NZ_CP117373 Location: 307005..315694 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM043 Replicon: chromosome
Accession: NZ_CP117373 Location: 307005..315694 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM043 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ08_RS01380 (302808) | 302808..303912 | + | 1105 | Protein_271 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PQQ08_RS01385 (303996) | 303996..304130 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| PQQ08_RS01390 (304108) | 304108..304491 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PQQ08_RS01395 (304913) | 304913..306022 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PQQ08_RS01400 (306082) | 306082..307008 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PQQ08_RS01405 (307005) | 307005..308282 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PQQ08_RS01410 (308279) | 308279..309046 | + | 768 | WP_001751764.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PQQ08_RS01415 (309048) | 309048..309761 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PQQ08_RS01420 (309892) | 309892..310113 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ08_RS01425 (310110) | 310110..310478 | + | 369 | WP_001575091.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PQQ08_RS01430 (310735) | 310735..312051 | + | 1317 | WP_000624752.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PQQ08_RS01435 (312156) | 312156..313043 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PQQ08_RS01440 (313040) | 313040..313885 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PQQ08_RS01445 (313887) | 313887..314957 | + | 1071 | WP_000907846.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PQQ08_RS01450 (314954) | 314954..315694 | + | 741 | WP_000073545.1 | glycerophosphodiester phosphodiesterase | - |
| PQQ08_RS01455 (315691) | 315691..316107 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| PQQ08_RS01460 (316233) | 316233..317975 | + | 1743 | WP_000805110.1 | gamma-glutamyltransferase | - |
| PQQ08_RS01465 (318020) | 318020..319054 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| PQQ08_RS01470 (319051) | 319051..320022 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|