MGE detailed information
MGE type: Conjugative plasmid MGE length: 101652 bp
Accession: NZ_CP117360 Location: 1..101652 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: plasmid pRM094_1
Accession: NZ_CP117360 Location: 1..101652 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM094 Replicon: plasmid pRM094_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PQP87_RS23750 (PQP87_23750) | 1..1101 | + | 1101 | WP_000350011.1 | RepB family plasmid replication initiator protein | - |
PQP87_RS23755 (PQP87_23755) | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
PQP87_RS23760 (PQP87_23760) | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
PQP87_RS23765 (PQP87_23765) | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
PQP87_RS23770 (PQP87_23770) | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
PQP87_RS23775 (PQP87_23775) | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
PQP87_RS23780 (PQP87_23780) | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
PQP87_RS23785 (PQP87_23785) | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
PQP87_RS23790 (PQP87_23790) | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
PQP87_RS23795 (PQP87_23795) | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
PQP87_RS23800 (PQP87_23800) | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
PQP87_RS23805 (PQP87_23805) | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
PQP87_RS23810 (PQP87_23810) | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
PQP87_RS23815 (PQP87_23815) | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
PQP87_RS23820 (PQP87_23820) | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
PQP87_RS23825 (PQP87_23825) | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
PQP87_RS23830 (PQP87_23830) | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
PQP87_RS23835 (PQP87_23835) | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
PQP87_RS23840 (PQP87_23840) | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
PQP87_RS23845 (PQP87_23845) | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
PQP87_RS23850 (PQP87_23850) | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
PQP87_RS23855 (PQP87_23855) | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
PQP87_RS23860 (PQP87_23860) | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
PQP87_RS23865 (PQP87_23865) | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
PQP87_RS23870 (PQP87_23870) | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
PQP87_RS23875 (PQP87_23875) | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
PQP87_RS23880 (PQP87_23880) | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
PQP87_RS23885 (PQP87_23885) | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
PQP87_RS23890 (PQP87_23890) | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
PQP87_RS23895 (PQP87_23895) | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
PQP87_RS23900 (PQP87_23900) | 19018..19197 | + | 180 | Protein_31 | helix-turn-helix domain-containing protein | - |
PQP87_RS23905 (PQP87_23905) | 19262..19966 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
PQP87_RS23910 (PQP87_23910) | 19912..20493 | - | 582 | WP_058663077.1 | lipocalin family protein | - |
PQP87_RS23915 (PQP87_23915) | 20587..21732 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
PQP87_RS23920 (PQP87_23920) | 22056..23318 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
PQP87_RS23925 (PQP87_23925) | 23603..23995 | - | 393 | WP_000479535.1 | TraA family conjugative transfer protein | - |
PQP87_RS23930 (PQP87_23930) | 23999..24577 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
PQP87_RS23935 (PQP87_23935) | 24574..25887 | - | 1314 | WP_024131605.1 | TraB/VirB10 family protein | - |
PQP87_RS23940 (PQP87_23940) | 25887..26804 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
PQP87_RS23945 (PQP87_23945) | 26788..27414 | - | 627 | WP_001049717.1 | TraE/TraK family type IV conjugative transfer system protein | - |
PQP87_RS23950 (PQP87_23950) | 27411..27692 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
PQP87_RS23955 (PQP87_23955) | 27837..28202 | - | 366 | WP_001052530.1 | hypothetical protein | - |
PQP87_RS23960 (PQP87_23960) | 28538..29200 | - | 663 | WP_001231464.1 | hypothetical protein | - |
PQP87_RS23965 (PQP87_23965) | 29200..29577 | - | 378 | WP_000869297.1 | hypothetical protein | - |
PQP87_RS23970 (PQP87_23970) | 29587..30033 | - | 447 | WP_000122507.1 | hypothetical protein | - |
PQP87_RS23975 (PQP87_23975) | 30043..30672 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
PQP87_RS23980 (PQP87_23980) | 30629..31174 | - | 546 | WP_000228720.1 | hypothetical protein | - |
PQP87_RS23985 (PQP87_23985) | 31224..33089 | - | 1866 | WP_077779971.1 | conjugative transfer system coupling protein TraD | - |
PQP87_RS23990 (PQP87_23990) | 33086..36058 | - | 2973 | WP_001326173.1 | hypothetical protein | Relaxase |
PQP87_RS23995 (PQP87_23995) | 36226..36843 | + | 618 | WP_001249395.1 | hypothetical protein | - |
PQP87_RS24000 (PQP87_24000) | 36825..37058 | + | 234 | WP_001191890.1 | hypothetical protein | - |
PQP87_RS24005 (PQP87_24005) | 37058..39250 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
PQP87_RS24010 (PQP87_24010) | 39265..39753 | + | 489 | WP_000467110.1 | hypothetical protein | - |
PQP87_RS24015 (PQP87_24015) | 39844..40122 | - | 279 | WP_000746034.1 | hypothetical protein | - |
PQP87_RS24020 (PQP87_24020) | 40355..40972 | - | 618 | WP_000464630.1 | hypothetical protein | - |
PQP87_RS24025 (PQP87_24025) | 41028..41684 | - | 657 | WP_000268552.1 | hypothetical protein | - |
PQP87_RS24030 (PQP87_24030) | 41684..43111 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
PQP87_RS24035 (PQP87_24035) | 43115..43615 | - | 501 | WP_000647188.1 | hypothetical protein | - |
PQP87_RS24040 (PQP87_24040) | 43624..43935 | - | 312 | WP_001447539.1 | hypothetical protein | - |
PQP87_RS24045 (PQP87_24045) | 43941..44447 | - | 507 | WP_000566443.1 | hypothetical protein | - |
PQP87_RS24050 (PQP87_24050) | 44440..45114 | - | 675 | WP_000344149.1 | hypothetical protein | - |
PQP87_RS24055 (PQP87_24055) | 45089..45370 | - | 282 | WP_000044823.1 | hypothetical protein | - |
PQP87_RS24060 (PQP87_24060) | 45363..45740 | - | 378 | WP_001125904.1 | hypothetical protein | - |
PQP87_RS24065 (PQP87_24065) | 46067..46210 | + | 144 | WP_000939033.1 | hypothetical protein | - |
PQP87_RS24070 (PQP87_24070) | 46302..46937 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
PQP87_RS24075 (PQP87_24075) | 46990..47262 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
PQP87_RS24080 (PQP87_24080) | 47311..48492 | - | 1182 | WP_001207227.1 | KorB domain-containing protein | - |
PQP87_RS24085 (PQP87_24085) | 48496..49281 | - | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
PQP87_RS24090 (PQP87_24090) | 49455..49766 | - | 312 | WP_000338945.1 | hypothetical protein | - |
PQP87_RS24095 (PQP87_24095) | 50073..50888 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
PQP87_RS24100 (PQP87_24100) | 50949..51752 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
PQP87_RS24105 (PQP87_24105) | 51752..52588 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
PQP87_RS24110 (PQP87_24110) | 52894..53136 | + | 243 | WP_000844627.1 | transposase | - |
PQP87_RS24115 (PQP87_24115) | 53168..53818 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
PQP87_RS24120 (PQP87_24120) | 53924..55123 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
PQP87_RS24125 (PQP87_24125) | 55090..55278 | - | 189 | Protein_76 | IS91 family transposase | - |
PQP87_RS24130 (PQP87_24130) | 55390..55695 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
PQP87_RS24135 (PQP87_24135) | 55723..56937 | - | 1215 | WP_012728216.1 | Bicyclomycin resistance protein | ARG |
PQP87_RS24140 (PQP87_24140) | 57154..58038 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
PQP87_RS24145 (PQP87_24145) | 58069..59562 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
PQP87_RS24150 (PQP87_24150) | 59773..59997 | - | 225 | WP_000743213.1 | hypothetical protein | - |
PQP87_RS24155 (PQP87_24155) | 59994..60731 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
PQP87_RS24160 (PQP87_24160) | 61197..61901 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
PQP87_RS24165 (PQP87_24165) | 61966..63216 | - | 1251 | Protein_84 | transposase | - |
PQP87_RS24170 (PQP87_24170) | 63291..63959 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
PQP87_RS24175 (PQP87_24175) | 63995..64231 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
PQP87_RS24180 (PQP87_24180) | 64228..64590 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
PQP87_RS24185 (PQP87_24185) | 64608..65105 | - | 498 | Protein_88 | mercuric reductase | - |
PQP87_RS24190 (PQP87_24190) | 65266..66102 | - | 837 | WP_012728227.1 | TEM family class A beta-lactamase | - |
PQP87_RS24195 (PQP87_24195) | 66142..66846 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
PQP87_RS24200 (PQP87_24200) | 67056..68045 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
PQP87_RS24205 (PQP87_24205) | 68042..68278 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
PQP87_RS24210 (PQP87_24210) | 68275..68640 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
PQP87_RS24215 (PQP87_24215) | 68752..69390 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
PQP87_RS24220 (PQP87_24220) | 69405..71090 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
PQP87_RS24225 (PQP87_24225) | 71162..71437 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
PQP87_RS24230 (PQP87_24230) | 71453..71803 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
PQP87_RS24235 (PQP87_24235) | 71875..72309 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
PQP87_RS24240 (PQP87_24240) | 72409..73413 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
PQP87_RS24245 (PQP87_24245) | 73690..73809 | + | 120 | Protein_100 | permease | - |
PQP87_RS24250 (PQP87_24250) | 73819..73935 | + | 117 | WP_000338626.1 | hypothetical protein | - |
PQP87_RS24255 (PQP87_24255) | 74056..74430 | + | 375 | WP_000868820.1 | hypothetical protein | - |
PQP87_RS24260 (PQP87_24260) | 74544..75269 | + | 726 | WP_000988731.1 | hypothetical protein | - |
PQP87_RS24265 (PQP87_24265) | 75510..79655 | + | 4146 | WP_011872905.1 | RHS repeat-associated core domain-containing protein | - |
PQP87_RS24270 (PQP87_24270) | 79645..80067 | + | 423 | WP_001165345.1 | hypothetical protein | - |
PQP87_RS24275 (PQP87_24275) | 80238..80690 | + | 453 | Protein_106 | hypothetical protein | - |
PQP87_RS24280 (PQP87_24280) | 80706..81308 | - | 603 | WP_000278322.1 | hypothetical protein | - |
PQP87_RS24285 (PQP87_24285) | 81578..81859 | + | 282 | WP_000575657.1 | hypothetical protein | - |
PQP87_RS24290 (PQP87_24290) | 82158..82694 | + | 537 | WP_000949433.1 | hypothetical protein | - |
PQP87_RS24295 (PQP87_24295) | 82697..83707 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
PQP87_RS24300 (PQP87_24300) | 83712..84581 | + | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
PQP87_RS24305 (PQP87_24305) | 84578..85069 | + | 492 | WP_000139717.1 | hypothetical protein | - |
PQP87_RS24310 (PQP87_24310) | 85396..86271 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
PQP87_RS24315 (PQP87_24315) | 86425..87465 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
PQP87_RS24320 (PQP87_24320) | 87752..89263 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
PQP87_RS24325 (PQP87_24325) | 89374..90414 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
PQP87_RS24330 (PQP87_24330) | 90416..91849 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
PQP87_RS24335 (PQP87_24335) | 91862..95476 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
PQP87_RS24340 (PQP87_24340) | 95514..95876 | - | 363 | WP_000683483.1 | hypothetical protein | - |
PQP87_RS24345 (PQP87_24345) | 96592..96864 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
PQP87_RS24350 (PQP87_24350) | 96864..97397 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
PQP87_RS24355 (PQP87_24355) | 97408..98016 | + | 609 | WP_000891157.1 | hypothetical protein | - |
PQP87_RS24360 (PQP87_24360) | 98013..98564 | + | 552 | WP_001020646.1 | FlhC family transcriptional regulator | - |
PQP87_RS24365 (PQP87_24365) | 98624..99043 | - | 420 | WP_000651490.1 | H-NS family nucleoid-associated regulatory protein | - |
PQP87_RS24370 (PQP87_24370) | 99045..99338 | - | 294 | WP_000919078.1 | hypothetical protein | - |
PQP87_RS24375 (PQP87_24375) | 99355..100338 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
PQP87_RS24380 (PQP87_24380) | 100837..101376 | + | 540 | WP_001447712.1 | conjugative transfer protein MobI(A/C) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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